Gene : Glyma.07G260200 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR24349:SF89 - CALCIUM-DEPENDENT PROTEIN KINASE 29 Genomic Order:  2602
Name:  ? Glyma.07G260200 Secondary Identifier:  ? PAC:30493452
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G260200 0.5kb upstream 0.5kb upstream 4995 true Chr07: 43553262-43558256 Glycine max
Glyma.07G260200 0.5kb upstream 0.5kb upstream 500 false Chr07: 43553262-43553761 Glycine max
Glyma.07G260200 0.5kb downstream 0.5kb downstream 4995 true Chr07: 43553762-43558756 Glycine max
Glyma.07G260200 0.5kb downstream 0.5kb downstream 500 false Chr07: 43558257-43558756 Glycine max
Glyma.07G260200 1.0kb upstream 1.0kb upstream 5495 true Chr07: 43552762-43558256 Glycine max
Glyma.07G260200 1.0kb upstream 1.0kb upstream 1000 false Chr07: 43552762-43553761 Glycine max
Glyma.07G260200 1.0kb downstream 1.0kb downstream 5495 true Chr07: 43553762-43559256 Glycine max
Glyma.07G260200 1.0kb downstream 1.0kb downstream 1000 false Chr07: 43558257-43559256 Glycine max
Glyma.07G260200 2.0kb upstream 2.0kb upstream 6495 true Chr07: 43551762-43558256 Glycine max
Glyma.07G260200 2.0kb upstream 2.0kb upstream 2000 false Chr07: 43551762-43553761 Glycine max
Glyma.07G260200 2.0kb downstream 2.0kb downstream 6495 true Chr07: 43553762-43560256 Glycine max
Glyma.07G260200 2.0kb downstream 2.0kb downstream 2000 false Chr07: 43558257-43560256 Glycine max
Glyma.07G260200 5.0kb upstream 5.0kb upstream 9495 true Chr07: 43548762-43558256 Glycine max
Glyma.07G260200 5.0kb upstream 5.0kb upstream 5000 false Chr07: 43548762-43553761 Glycine max
Glyma.07G260200 5.0kb downstream 5.0kb downstream 9495 true Chr07: 43553762-43563256 Glycine max
Glyma.07G260200 5.0kb downstream 5.0kb downstream 5000 false Chr07: 43558257-43563256 Glycine max
Glyma.07G260200 10.0kb upstream 10.0kb upstream 14495 true Chr07: 43543762-43558256 Glycine max
Glyma.07G260200 10.0kb upstream 10.0kb upstream 10000 false Chr07: 43543762-43553761 Glycine max
Glyma.07G260200 10.0kb downstream 10.0kb downstream 14495 true Chr07: 43553762-43568256 Glycine max
Glyma.07G260200 10.0kb downstream 10.0kb downstream 10000 false Chr07: 43558257-43568256 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304470 5265 Fabidae View MSA
124069145 5270 Rosid View MSA
123751027 5271 Pentapetalae View MSA
122788788 5272 Eudicot View MSA
122048153 5273 Angiosperm View MSA
121310867 5274 Embryophyte View MSA
123428456 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.06631 0.0 24.4265   Low
cufflinks 31.4655 0.0 86.8098 High  
cufflinks 11.1121 0.0 29.7192   Low
cufflinks 43.1979 0.0 123.522 High  
cufflinks 41.3887 0.0 117.767 High  
cufflinks 14.1284 0.0 37.6928    
cufflinks 46.6863 0.0 134.726 High High
cufflinks 35.71 0.0 99.8391 High  
cufflinks 25.9166 0.0 70.4885 High  
cufflinks 14.78     High High
cufflinks 2.55       Low
cufflinks 11.627     High  
cufflinks 16.68     High High
cufflinks 21.813     High High
cufflinks 2.617       Low
cufflinks 5.044        
cufflinks 4.486        
cufflinks 11.988     High  
cufflinks 18.722     High High
cufflinks 4.809        
cufflinks 3.953        
cufflinks 5.141        
cufflinks 6.081        
cufflinks 2.489       Low
cufflinks 4.734        
cufflinks 5.331        

0 Strain