Gene : Glyma.07G252000 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR10809:SF59 - VESICLE-ASSOCIATED PROTEIN 2-2 Genomic Order:  2520
Name:  ? Glyma.07G252000 Secondary Identifier:  ? PAC:30492416
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Ontology Annotation Displayer

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Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G252000 0.5kb upstream 0.5kb upstream 3770 true Chr07: 42949211-42952980 Glycine max
Glyma.07G252000 0.5kb upstream 0.5kb upstream 500 false Chr07: 42952481-42952980 Glycine max
Glyma.07G252000 0.5kb downstream 0.5kb downstream 3770 true Chr07: 42948711-42952480 Glycine max
Glyma.07G252000 0.5kb downstream 0.5kb downstream 500 false Chr07: 42948711-42949210 Glycine max
Glyma.07G252000 1.0kb upstream 1.0kb upstream 4270 true Chr07: 42949211-42953480 Glycine max
Glyma.07G252000 1.0kb upstream 1.0kb upstream 1000 false Chr07: 42952481-42953480 Glycine max
Glyma.07G252000 1.0kb downstream 1.0kb downstream 4270 true Chr07: 42948211-42952480 Glycine max
Glyma.07G252000 1.0kb downstream 1.0kb downstream 1000 false Chr07: 42948211-42949210 Glycine max
Glyma.07G252000 2.0kb upstream 2.0kb upstream 5270 true Chr07: 42949211-42954480 Glycine max
Glyma.07G252000 2.0kb upstream 2.0kb upstream 2000 false Chr07: 42952481-42954480 Glycine max
Glyma.07G252000 2.0kb downstream 2.0kb downstream 5270 true Chr07: 42947211-42952480 Glycine max
Glyma.07G252000 2.0kb downstream 2.0kb downstream 2000 false Chr07: 42947211-42949210 Glycine max
Glyma.07G252000 5.0kb upstream 5.0kb upstream 8270 true Chr07: 42949211-42957480 Glycine max
Glyma.07G252000 5.0kb upstream 5.0kb upstream 5000 false Chr07: 42952481-42957480 Glycine max
Glyma.07G252000 5.0kb downstream 5.0kb downstream 8270 true Chr07: 42944211-42952480 Glycine max
Glyma.07G252000 5.0kb downstream 5.0kb downstream 5000 false Chr07: 42944211-42949210 Glycine max
Glyma.07G252000 10.0kb upstream 10.0kb upstream 13270 true Chr07: 42949211-42962480 Glycine max
Glyma.07G252000 10.0kb upstream 10.0kb upstream 10000 false Chr07: 42952481-42962480 Glycine max
Glyma.07G252000 10.0kb downstream 10.0kb downstream 13270 true Chr07: 42939211-42952480 Glycine max
Glyma.07G252000 10.0kb downstream 10.0kb downstream 10000 false Chr07: 42939211-42949210 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300378 5265 Fabidae View MSA
124070661 5270 Rosid View MSA
123750934 5271 Pentapetalae View MSA
122796486 5272 Eudicot View MSA
122049501 5273 Angiosperm View MSA
121311441 5274 Embryophyte View MSA
123348736 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.99645 0.0 25.6347   Low
cufflinks 15.1106 0.0 59.0094    
cufflinks 3.97353 0.0 19.3992   Low
cufflinks 11.6827 0.0 47.2707    
cufflinks 11.1277 0.0 54.1952    
cufflinks 11.1631 0.0 46.3889    
cufflinks 20.1219 0.0 69.5303   High
cufflinks 15.2093 0.0 53.5562    
cufflinks 9.16181 0.0 35.0735    
cufflinks 2.287       High
cufflinks 0.387       Low
cufflinks 0.992        
cufflinks 2.366       High
cufflinks 1.629        
cufflinks 0.164       Low
cufflinks 1.413        
cufflinks 0.941        
cufflinks 1.422        
cufflinks 2.425       High
cufflinks 1.457        
cufflinks 0.703        
cufflinks 1.435        
cufflinks 1.161        
cufflinks 0.343       Low
cufflinks 1.261        
cufflinks 0.811        

0 Strain