Gene : Glyma.07G253500 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR31621:SF1 - DUF679 DOMAIN MEMBRANE PROTEIN 1 Genomic Order:  2535
Name:  ? Glyma.07G253500 Secondary Identifier:  ? PAC:30493192
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G253500 0.5kb upstream 0.5kb upstream 1773 true Chr07: 43064754-43066526 Glycine max
Glyma.07G253500 0.5kb upstream 0.5kb upstream 500 false Chr07: 43064754-43065253 Glycine max
Glyma.07G253500 0.5kb downstream 0.5kb downstream 1773 true Chr07: 43065254-43067026 Glycine max
Glyma.07G253500 0.5kb downstream 0.5kb downstream 500 false Chr07: 43066527-43067026 Glycine max
Glyma.07G253500 1.0kb upstream 1.0kb upstream 2273 true Chr07: 43064254-43066526 Glycine max
Glyma.07G253500 1.0kb upstream 1.0kb upstream 1000 false Chr07: 43064254-43065253 Glycine max
Glyma.07G253500 1.0kb downstream 1.0kb downstream 2273 true Chr07: 43065254-43067526 Glycine max
Glyma.07G253500 1.0kb downstream 1.0kb downstream 1000 false Chr07: 43066527-43067526 Glycine max
Glyma.07G253500 2.0kb upstream 2.0kb upstream 3273 true Chr07: 43063254-43066526 Glycine max
Glyma.07G253500 2.0kb upstream 2.0kb upstream 2000 false Chr07: 43063254-43065253 Glycine max
Glyma.07G253500 2.0kb downstream 2.0kb downstream 3273 true Chr07: 43065254-43068526 Glycine max
Glyma.07G253500 2.0kb downstream 2.0kb downstream 2000 false Chr07: 43066527-43068526 Glycine max
Glyma.07G253500 5.0kb upstream 5.0kb upstream 6273 true Chr07: 43060254-43066526 Glycine max
Glyma.07G253500 5.0kb upstream 5.0kb upstream 5000 false Chr07: 43060254-43065253 Glycine max
Glyma.07G253500 5.0kb downstream 5.0kb downstream 6273 true Chr07: 43065254-43071526 Glycine max
Glyma.07G253500 5.0kb downstream 5.0kb downstream 5000 false Chr07: 43066527-43071526 Glycine max
Glyma.07G253500 10.0kb upstream 10.0kb upstream 11273 true Chr07: 43055254-43066526 Glycine max
Glyma.07G253500 10.0kb upstream 10.0kb upstream 10000 false Chr07: 43055254-43065253 Glycine max
Glyma.07G253500 10.0kb downstream 10.0kb downstream 11273 true Chr07: 43065254-43076526 Glycine max
Glyma.07G253500 10.0kb downstream 10.0kb downstream 10000 false Chr07: 43066527-43076526 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254193 5265 Fabidae View MSA
124066141 5270 Rosid View MSA
123749826 5271 Pentapetalae View MSA
122795559 5272 Eudicot View MSA
122046671 5273 Angiosperm View MSA
121349168 5274 Embryophyte View MSA
123426818 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 16.0545 0.0 43.9033   High
cufflinks 12.8045 0.0 35.7015    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 12.5766 0.0 35.1206    
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 16.837     High High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.188        
cufflinks 0.014     Low Low
cufflinks 0.285        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.867        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.025     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 3.01        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 11.399     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 18.834     High High

0 Strain