Gene : Glyma.07G249800 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR21689:SF2 - PROTEIN LIN-9 HOMOLOG Genomic Order:  2498
Name:  ? Glyma.07G249800 Secondary Identifier:  ? PAC:30495491
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G249800 0.5kb upstream 0.5kb upstream 17454 true Chr07: 42775448-42792901 Glycine max
Glyma.07G249800 0.5kb upstream 0.5kb upstream 500 false Chr07: 42792402-42792901 Glycine max
Glyma.07G249800 0.5kb downstream 0.5kb downstream 17454 true Chr07: 42774948-42792401 Glycine max
Glyma.07G249800 0.5kb downstream 0.5kb downstream 500 false Chr07: 42774948-42775447 Glycine max
Glyma.07G249800 1.0kb upstream 1.0kb upstream 17954 true Chr07: 42775448-42793401 Glycine max
Glyma.07G249800 1.0kb upstream 1.0kb upstream 1000 false Chr07: 42792402-42793401 Glycine max
Glyma.07G249800 1.0kb downstream 1.0kb downstream 17954 true Chr07: 42774448-42792401 Glycine max
Glyma.07G249800 1.0kb downstream 1.0kb downstream 1000 false Chr07: 42774448-42775447 Glycine max
Glyma.07G249800 2.0kb upstream 2.0kb upstream 18954 true Chr07: 42775448-42794401 Glycine max
Glyma.07G249800 2.0kb upstream 2.0kb upstream 2000 false Chr07: 42792402-42794401 Glycine max
Glyma.07G249800 2.0kb downstream 2.0kb downstream 18954 true Chr07: 42773448-42792401 Glycine max
Glyma.07G249800 2.0kb downstream 2.0kb downstream 2000 false Chr07: 42773448-42775447 Glycine max
Glyma.07G249800 5.0kb upstream 5.0kb upstream 21954 true Chr07: 42775448-42797401 Glycine max
Glyma.07G249800 5.0kb upstream 5.0kb upstream 5000 false Chr07: 42792402-42797401 Glycine max
Glyma.07G249800 5.0kb downstream 5.0kb downstream 21954 true Chr07: 42770448-42792401 Glycine max
Glyma.07G249800 5.0kb downstream 5.0kb downstream 5000 false Chr07: 42770448-42775447 Glycine max
Glyma.07G249800 10.0kb upstream 10.0kb upstream 26954 true Chr07: 42775448-42802401 Glycine max
Glyma.07G249800 10.0kb upstream 10.0kb upstream 10000 false Chr07: 42792402-42802401 Glycine max
Glyma.07G249800 10.0kb downstream 10.0kb downstream 26954 true Chr07: 42765448-42792401 Glycine max
Glyma.07G249800 10.0kb downstream 10.0kb downstream 10000 false Chr07: 42765448-42775447 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040981 5273 Angiosperm View MSA
122300999 5265 Fabidae View MSA
124072139 5270 Rosid View MSA
123744019 5271 Pentapetalae View MSA
122796198 5272 Eudicot View MSA
121349318 5274 Embryophyte View MSA
123424502 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.09801 0.0 25.3614    
cufflinks 5.05624 0.0 22.2298    
cufflinks 8.28275 0.0 34.3978   High
cufflinks 4.78474 0.0 20.0959    
cufflinks 4.08305 0.0 19.3917   Low
cufflinks 5.21074 0.0 19.8001    
cufflinks 6.02905 0.0 27.813    
cufflinks 5.86129 0.0 24.5054    
cufflinks 3.9074 0.0 17.3433   Low
cufflinks 0.35        
cufflinks 0.35        
cufflinks 0.354        
cufflinks 0.329        
cufflinks 0.307       Low
cufflinks 0.575       High
cufflinks 0.534       High
cufflinks 0.211       Low
cufflinks 0.405        
cufflinks 0.513        
cufflinks 0.492        
cufflinks 0.442        
cufflinks 0.521        
cufflinks 0.386        
cufflinks 0.447        
cufflinks 0.524        
cufflinks 0.428        

0 Strain