Gene : Glyma.07G250100 G. max Wm82.a2.v1
Defline:  (1 of 354) PF00847 - AP2 domain (AP2) Genomic Order:  2501
Name:  ? Glyma.07G250100 Secondary Identifier:  ? PAC:30492843
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G250100 0.5kb upstream 0.5kb upstream 1541 true Chr07: 42816239-42817779 Glycine max
Glyma.07G250100 0.5kb upstream 0.5kb upstream 500 false Chr07: 42817280-42817779 Glycine max
Glyma.07G250100 0.5kb downstream 0.5kb downstream 1541 true Chr07: 42815739-42817279 Glycine max
Glyma.07G250100 0.5kb downstream 0.5kb downstream 500 false Chr07: 42815739-42816238 Glycine max
Glyma.07G250100 1.0kb upstream 1.0kb upstream 2041 true Chr07: 42816239-42818279 Glycine max
Glyma.07G250100 1.0kb upstream 1.0kb upstream 1000 false Chr07: 42817280-42818279 Glycine max
Glyma.07G250100 1.0kb downstream 1.0kb downstream 2041 true Chr07: 42815239-42817279 Glycine max
Glyma.07G250100 1.0kb downstream 1.0kb downstream 1000 false Chr07: 42815239-42816238 Glycine max
Glyma.07G250100 2.0kb upstream 2.0kb upstream 3041 true Chr07: 42816239-42819279 Glycine max
Glyma.07G250100 2.0kb upstream 2.0kb upstream 2000 false Chr07: 42817280-42819279 Glycine max
Glyma.07G250100 2.0kb downstream 2.0kb downstream 3041 true Chr07: 42814239-42817279 Glycine max
Glyma.07G250100 2.0kb downstream 2.0kb downstream 2000 false Chr07: 42814239-42816238 Glycine max
Glyma.07G250100 5.0kb upstream 5.0kb upstream 6041 true Chr07: 42816239-42822279 Glycine max
Glyma.07G250100 5.0kb upstream 5.0kb upstream 5000 false Chr07: 42817280-42822279 Glycine max
Glyma.07G250100 5.0kb downstream 5.0kb downstream 6041 true Chr07: 42811239-42817279 Glycine max
Glyma.07G250100 5.0kb downstream 5.0kb downstream 5000 false Chr07: 42811239-42816238 Glycine max
Glyma.07G250100 10.0kb upstream 10.0kb upstream 11041 true Chr07: 42816239-42827279 Glycine max
Glyma.07G250100 10.0kb upstream 10.0kb upstream 10000 false Chr07: 42817280-42827279 Glycine max
Glyma.07G250100 10.0kb downstream 10.0kb downstream 11041 true Chr07: 42806239-42817279 Glycine max
Glyma.07G250100 10.0kb downstream 10.0kb downstream 10000 false Chr07: 42806239-42816238 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305116 5265 Fabidae View MSA
124050162 5270 Rosid View MSA
123753503 5271 Pentapetalae View MSA
122795493 5272 Eudicot View MSA
122048706 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0141509 0.0 0.0669515 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.920886 0.0 3.40226   High
cufflinks 0.170441 0.0 0.676909 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0428153 0.0 0.182573 Low  
cufflinks 0.526262 0.0 1.99609    
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.129        
cufflinks 0.043     Low Low
cufflinks 0.975       High
cufflinks 0.427        
cufflinks 0.053        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.273        
cufflinks 0.035     Low Low
cufflinks 0.114        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.182        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.036     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.554       High

0 Strain