Gene : Glyma.07G240700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR20858:SF18 - PROTEIN PET18 Genomic Order:  2407
Name:  ? Glyma.07G240700 Secondary Identifier:  ? PAC:30492197
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G240700 0.5kb upstream 0.5kb upstream 4007 true Chr07: 42122559-42126565 Glycine max
Glyma.07G240700 0.5kb upstream 0.5kb upstream 500 false Chr07: 42122559-42123058 Glycine max
Glyma.07G240700 0.5kb downstream 0.5kb downstream 4007 true Chr07: 42123059-42127065 Glycine max
Glyma.07G240700 0.5kb downstream 0.5kb downstream 500 false Chr07: 42126566-42127065 Glycine max
Glyma.07G240700 1.0kb upstream 1.0kb upstream 4507 true Chr07: 42122059-42126565 Glycine max
Glyma.07G240700 1.0kb upstream 1.0kb upstream 1000 false Chr07: 42122059-42123058 Glycine max
Glyma.07G240700 1.0kb downstream 1.0kb downstream 4507 true Chr07: 42123059-42127565 Glycine max
Glyma.07G240700 1.0kb downstream 1.0kb downstream 1000 false Chr07: 42126566-42127565 Glycine max
Glyma.07G240700 2.0kb upstream 2.0kb upstream 5507 true Chr07: 42121059-42126565 Glycine max
Glyma.07G240700 2.0kb upstream 2.0kb upstream 2000 false Chr07: 42121059-42123058 Glycine max
Glyma.07G240700 2.0kb downstream 2.0kb downstream 5507 true Chr07: 42123059-42128565 Glycine max
Glyma.07G240700 2.0kb downstream 2.0kb downstream 2000 false Chr07: 42126566-42128565 Glycine max
Glyma.07G240700 5.0kb upstream 5.0kb upstream 8507 true Chr07: 42118059-42126565 Glycine max
Glyma.07G240700 5.0kb upstream 5.0kb upstream 5000 false Chr07: 42118059-42123058 Glycine max
Glyma.07G240700 5.0kb downstream 5.0kb downstream 8507 true Chr07: 42123059-42131565 Glycine max
Glyma.07G240700 5.0kb downstream 5.0kb downstream 5000 false Chr07: 42126566-42131565 Glycine max
Glyma.07G240700 10.0kb upstream 10.0kb upstream 13507 true Chr07: 42113059-42126565 Glycine max
Glyma.07G240700 10.0kb upstream 10.0kb upstream 10000 false Chr07: 42113059-42123058 Glycine max
Glyma.07G240700 10.0kb downstream 10.0kb downstream 13507 true Chr07: 42123059-42136565 Glycine max
Glyma.07G240700 10.0kb downstream 10.0kb downstream 10000 false Chr07: 42126566-42136565 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308436 5265 Fabidae View MSA
124066037 5270 Rosid View MSA
123738905 5271 Pentapetalae View MSA
122790615 5272 Eudicot View MSA
122042801 5273 Angiosperm View MSA
121348004 5274 Embryophyte View MSA
123425587 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.431865 0.0 1.65685   High
cufflinks 0.16417 0.0 0.65417 Low  
cufflinks 0.302061 0.0 1.17654    
cufflinks 0.14198 0.0 0.568444 Low  
cufflinks 0.0402455 0.0 0.173777 Low Low
cufflinks 0.0444841 0.0 0.190637 Low Low
cufflinks 0.65178 0.0 2.45594   High
cufflinks 0.117658 0.0 0.47464 Low  
cufflinks 0.0714059 0.0 0.29558 Low  
cufflinks 0.008     Low Low
cufflinks 0.05     Low  
cufflinks 0.24        
cufflinks 0.046     Low  
cufflinks 0.031     Low Low
cufflinks 0.048     Low  
cufflinks 0.284        
cufflinks 0.031     Low Low
cufflinks 0.195        
cufflinks 0.298        
cufflinks 0.325       High
cufflinks 0.049     Low  
cufflinks 0.382       High
cufflinks 0.34       High
cufflinks 0.075        
cufflinks 0.404       High
cufflinks 0.058     Low  

0 Strain