Gene : Glyma.08G011500 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR31251:SF20 - SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 13A-RELATED Genomic Order:  115
Name:  ? Glyma.08G011500 Secondary Identifier:  ? PAC:30536220
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G011500 0.5kb upstream 0.5kb upstream 4246 true Chr08: 918888-923133 Glycine max
Glyma.08G011500 0.5kb upstream 0.5kb upstream 500 false Chr08: 918888-919387 Glycine max
Glyma.08G011500 0.5kb downstream 0.5kb downstream 4246 true Chr08: 919388-923633 Glycine max
Glyma.08G011500 0.5kb downstream 0.5kb downstream 500 false Chr08: 923134-923633 Glycine max
Glyma.08G011500 1.0kb upstream 1.0kb upstream 4746 true Chr08: 918388-923133 Glycine max
Glyma.08G011500 1.0kb upstream 1.0kb upstream 1000 false Chr08: 918388-919387 Glycine max
Glyma.08G011500 1.0kb downstream 1.0kb downstream 4746 true Chr08: 919388-924133 Glycine max
Glyma.08G011500 1.0kb downstream 1.0kb downstream 1000 false Chr08: 923134-924133 Glycine max
Glyma.08G011500 2.0kb upstream 2.0kb upstream 5746 true Chr08: 917388-923133 Glycine max
Glyma.08G011500 2.0kb upstream 2.0kb upstream 2000 false Chr08: 917388-919387 Glycine max
Glyma.08G011500 2.0kb downstream 2.0kb downstream 5746 true Chr08: 919388-925133 Glycine max
Glyma.08G011500 2.0kb downstream 2.0kb downstream 2000 false Chr08: 923134-925133 Glycine max
Glyma.08G011500 5.0kb upstream 5.0kb upstream 8746 true Chr08: 914388-923133 Glycine max
Glyma.08G011500 5.0kb upstream 5.0kb upstream 5000 false Chr08: 914388-919387 Glycine max
Glyma.08G011500 5.0kb downstream 5.0kb downstream 8746 true Chr08: 919388-928133 Glycine max
Glyma.08G011500 5.0kb downstream 5.0kb downstream 5000 false Chr08: 923134-928133 Glycine max
Glyma.08G011500 10.0kb upstream 10.0kb upstream 13746 true Chr08: 909388-923133 Glycine max
Glyma.08G011500 10.0kb upstream 10.0kb upstream 10000 false Chr08: 909388-919387 Glycine max
Glyma.08G011500 10.0kb downstream 10.0kb downstream 13746 true Chr08: 919388-933133 Glycine max
Glyma.08G011500 10.0kb downstream 10.0kb downstream 10000 false Chr08: 923134-933133 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311176 5265 Fabidae View MSA
124071884 5270 Rosid View MSA
123752325 5271 Pentapetalae View MSA
122795767 5272 Eudicot View MSA
122050333 5273 Angiosperm View MSA
123428908 5275 Viridiplantae View MSA
121351727 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.125871 0.0 0.4954 Low Low
cufflinks 8.41982 0.0 31.0259   High
cufflinks 2.53549 0.0 14.9869    
cufflinks 2.90509 0.0 12.0108    
cufflinks 0.141699 0.0 0.553809 Low Low
cufflinks 0.537608 0.0 3.60168    
cufflinks 0.143025 0.0 0.55786 Low Low
cufflinks 0.597803 0.0 4.32664    
cufflinks 0.460566 0.0 2.87879    
cufflinks 0.309       High
cufflinks 0.005     Low  
cufflinks 0.279       High
cufflinks 0.006     Low  
cufflinks 0.001     Low Low
cufflinks 0.008     Low  
cufflinks 0.063     Low  
cufflinks 0.041     Low  
cufflinks 0.084     Low  
cufflinks 1.823       High
cufflinks 0.031     Low  
cufflinks 0.006     Low  
cufflinks 0.029     Low  
cufflinks 0.038     Low  
cufflinks 0.001     Low Low
cufflinks 0.04     Low  
cufflinks 0.007     Low  

0 Strain