Gene : Glyma.07G272400 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR12696 - TIP120 Genomic Order:  2724
Name:  ? Glyma.07G272400 Secondary Identifier:  ? PAC:30494960
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G272400 0.5kb upstream 0.5kb upstream 13248 true Chr07: 44450769-44464016 Glycine max
Glyma.07G272400 0.5kb upstream 0.5kb upstream 500 false Chr07: 44450769-44451268 Glycine max
Glyma.07G272400 0.5kb downstream 0.5kb downstream 13248 true Chr07: 44451269-44464516 Glycine max
Glyma.07G272400 0.5kb downstream 0.5kb downstream 500 false Chr07: 44464017-44464516 Glycine max
Glyma.07G272400 1.0kb upstream 1.0kb upstream 13748 true Chr07: 44450269-44464016 Glycine max
Glyma.07G272400 1.0kb upstream 1.0kb upstream 1000 false Chr07: 44450269-44451268 Glycine max
Glyma.07G272400 1.0kb downstream 1.0kb downstream 13748 true Chr07: 44451269-44465016 Glycine max
Glyma.07G272400 1.0kb downstream 1.0kb downstream 1000 false Chr07: 44464017-44465016 Glycine max
Glyma.07G272400 2.0kb upstream 2.0kb upstream 14748 true Chr07: 44449269-44464016 Glycine max
Glyma.07G272400 2.0kb upstream 2.0kb upstream 2000 false Chr07: 44449269-44451268 Glycine max
Glyma.07G272400 2.0kb downstream 2.0kb downstream 14748 true Chr07: 44451269-44466016 Glycine max
Glyma.07G272400 2.0kb downstream 2.0kb downstream 2000 false Chr07: 44464017-44466016 Glycine max
Glyma.07G272400 5.0kb upstream 5.0kb upstream 17748 true Chr07: 44446269-44464016 Glycine max
Glyma.07G272400 5.0kb upstream 5.0kb upstream 5000 false Chr07: 44446269-44451268 Glycine max
Glyma.07G272400 5.0kb downstream 5.0kb downstream 17748 true Chr07: 44451269-44469016 Glycine max
Glyma.07G272400 5.0kb downstream 5.0kb downstream 5000 false Chr07: 44464017-44469016 Glycine max
Glyma.07G272400 10.0kb upstream 10.0kb upstream 22748 true Chr07: 44441269-44464016 Glycine max
Glyma.07G272400 10.0kb upstream 10.0kb upstream 10000 false Chr07: 44441269-44451268 Glycine max
Glyma.07G272400 10.0kb downstream 10.0kb downstream 22748 true Chr07: 44451269-44474016 Glycine max
Glyma.07G272400 10.0kb downstream 10.0kb downstream 10000 false Chr07: 44464017-44474016 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299813 5265 Fabidae View MSA
124064777 5270 Rosid View MSA
123736693 5271 Pentapetalae View MSA
122792055 5272 Eudicot View MSA
122049783 5273 Angiosperm View MSA
121344585 5274 Embryophyte View MSA
123423876 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.0134 0.0 41.0621    
cufflinks 18.8626 0.0 52.7205    
cufflinks 15.3427 0.0 42.1995    
cufflinks 21.4241 0.0 60.7626 High  
cufflinks 18.7219 0.0 52.1785    
cufflinks 11.4271 0.0 30.7691   Low
cufflinks 27.2638 0.0 79.3676 High High
cufflinks 19.7255 0.0 55.4162    
cufflinks 19.2626 0.0 53.9606    
cufflinks 6.525        
cufflinks 2.581       Low
cufflinks 6.509        
cufflinks 7.739     High High
cufflinks 9.077     High High
cufflinks 4.247        
cufflinks 5.752        
cufflinks 3.624       Low
cufflinks 7.612     High High
cufflinks 7.999     High High
cufflinks 5.538        
cufflinks 3.659       Low
cufflinks 5.746        
cufflinks 5.784        
cufflinks 3.058       Low
cufflinks 5.614        
cufflinks 3.969        

0 Strain