Gene : Glyma.08G031400 G. max Wm82.a2.v1
Defline:  (1 of 16) KOG1595 - CCCH-type Zn-finger protein Genomic Order:  314
Name:  ? Glyma.08G031400 Secondary Identifier:  ? PAC:30535844
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G031400 0.5kb upstream 0.5kb upstream 2633 true Chr08: 2480603-2483235 Glycine max
Glyma.08G031400 0.5kb upstream 0.5kb upstream 500 false Chr08: 2482736-2483235 Glycine max
Glyma.08G031400 0.5kb downstream 0.5kb downstream 2633 true Chr08: 2480103-2482735 Glycine max
Glyma.08G031400 0.5kb downstream 0.5kb downstream 500 false Chr08: 2480103-2480602 Glycine max
Glyma.08G031400 1.0kb upstream 1.0kb upstream 3133 true Chr08: 2480603-2483735 Glycine max
Glyma.08G031400 1.0kb upstream 1.0kb upstream 1000 false Chr08: 2482736-2483735 Glycine max
Glyma.08G031400 1.0kb downstream 1.0kb downstream 3133 true Chr08: 2479603-2482735 Glycine max
Glyma.08G031400 1.0kb downstream 1.0kb downstream 1000 false Chr08: 2479603-2480602 Glycine max
Glyma.08G031400 2.0kb upstream 2.0kb upstream 4133 true Chr08: 2480603-2484735 Glycine max
Glyma.08G031400 2.0kb upstream 2.0kb upstream 2000 false Chr08: 2482736-2484735 Glycine max
Glyma.08G031400 2.0kb downstream 2.0kb downstream 4133 true Chr08: 2478603-2482735 Glycine max
Glyma.08G031400 2.0kb downstream 2.0kb downstream 2000 false Chr08: 2478603-2480602 Glycine max
Glyma.08G031400 5.0kb upstream 5.0kb upstream 7133 true Chr08: 2480603-2487735 Glycine max
Glyma.08G031400 5.0kb upstream 5.0kb upstream 5000 false Chr08: 2482736-2487735 Glycine max
Glyma.08G031400 5.0kb downstream 5.0kb downstream 7133 true Chr08: 2475603-2482735 Glycine max
Glyma.08G031400 5.0kb downstream 5.0kb downstream 5000 false Chr08: 2475603-2480602 Glycine max
Glyma.08G031400 10.0kb upstream 10.0kb upstream 12133 true Chr08: 2480603-2492735 Glycine max
Glyma.08G031400 10.0kb upstream 10.0kb upstream 10000 false Chr08: 2482736-2492735 Glycine max
Glyma.08G031400 10.0kb downstream 10.0kb downstream 12133 true Chr08: 2470603-2482735 Glycine max
Glyma.08G031400 10.0kb downstream 10.0kb downstream 10000 false Chr08: 2470603-2480602 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310889 5265 Fabidae View MSA
124070432 5270 Rosid View MSA
123751061 5271 Pentapetalae View MSA
122788502 5272 Eudicot View MSA
122046777 5273 Angiosperm View MSA
123429052 5275 Viridiplantae View MSA
121351105 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.01644 0.0 14.1805   Low
cufflinks 16.7355 0.0 44.6687    
cufflinks 16.8309 0.0 44.9158    
cufflinks 32.2212 0.0 88.6145 High  
cufflinks 26.0128 0.0 70.7704 High  
cufflinks 33.0205 0.0 91.3742 High  
cufflinks 36.4229 0.0 101.625 High High
cufflinks 14.9254 0.0 39.8195    
cufflinks 21.2016 0.0 56.9507 High  
cufflinks 4.412        
cufflinks 17.296     High  
cufflinks 13.365     High  
cufflinks 4.775        
cufflinks 2.624       Low
cufflinks 77.109     High High
cufflinks 8.668     High  
cufflinks 5.635        
cufflinks 10.535     High  
cufflinks 24.24     High  
cufflinks 8.238     High  
cufflinks 28.534     High High
cufflinks 6.453        
cufflinks 4.156       Low
cufflinks 12.464     High  
cufflinks 8.099     High  
cufflinks 39.09     High High

0 Strain