Gene : Glyma.08G037400 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR12446:SF14 - PROTEIN LIN-54 HOMOLOG Genomic Order:  374
Name:  ? Glyma.08G037400 Secondary Identifier:  ? PAC:30537033
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G037400 0.5kb upstream 0.5kb upstream 6700 true Chr08: 2950464-2957163 Glycine max
Glyma.08G037400 0.5kb upstream 0.5kb upstream 500 false Chr08: 2950464-2950963 Glycine max
Glyma.08G037400 0.5kb downstream 0.5kb downstream 6700 true Chr08: 2950964-2957663 Glycine max
Glyma.08G037400 0.5kb downstream 0.5kb downstream 500 false Chr08: 2957164-2957663 Glycine max
Glyma.08G037400 1.0kb upstream 1.0kb upstream 7200 true Chr08: 2949964-2957163 Glycine max
Glyma.08G037400 1.0kb upstream 1.0kb upstream 1000 false Chr08: 2949964-2950963 Glycine max
Glyma.08G037400 1.0kb downstream 1.0kb downstream 7200 true Chr08: 2950964-2958163 Glycine max
Glyma.08G037400 1.0kb downstream 1.0kb downstream 1000 false Chr08: 2957164-2958163 Glycine max
Glyma.08G037400 2.0kb upstream 2.0kb upstream 8200 true Chr08: 2948964-2957163 Glycine max
Glyma.08G037400 2.0kb upstream 2.0kb upstream 2000 false Chr08: 2948964-2950963 Glycine max
Glyma.08G037400 2.0kb downstream 2.0kb downstream 8200 true Chr08: 2950964-2959163 Glycine max
Glyma.08G037400 2.0kb downstream 2.0kb downstream 2000 false Chr08: 2957164-2959163 Glycine max
Glyma.08G037400 5.0kb upstream 5.0kb upstream 11200 true Chr08: 2945964-2957163 Glycine max
Glyma.08G037400 5.0kb upstream 5.0kb upstream 5000 false Chr08: 2945964-2950963 Glycine max
Glyma.08G037400 5.0kb downstream 5.0kb downstream 11200 true Chr08: 2950964-2962163 Glycine max
Glyma.08G037400 5.0kb downstream 5.0kb downstream 5000 false Chr08: 2957164-2962163 Glycine max
Glyma.08G037400 10.0kb upstream 10.0kb upstream 16200 true Chr08: 2940964-2957163 Glycine max
Glyma.08G037400 10.0kb upstream 10.0kb upstream 10000 false Chr08: 2940964-2950963 Glycine max
Glyma.08G037400 10.0kb downstream 10.0kb downstream 16200 true Chr08: 2950964-2967163 Glycine max
Glyma.08G037400 10.0kb downstream 10.0kb downstream 10000 false Chr08: 2957164-2967163 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254369 5265 Fabidae View MSA
124069206 5270 Rosid View MSA
123746618 5271 Pentapetalae View MSA
122795390 5272 Eudicot View MSA
122042831 5273 Angiosperm View MSA
121349847 5274 Embryophyte View MSA
123426596 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.57933 0.0 10.2648    
cufflinks 3.176 0.0 9.25457    
cufflinks 2.77917 0.0 8.22834    
cufflinks 3.10323 0.0 9.05561    
cufflinks 1.7182 0.0 5.4463    
cufflinks 1.56361 0.0 5.01865    
cufflinks 4.05754 0.0 11.4936   High
cufflinks 0.994892 0.0 3.38735   Low
cufflinks 1.9795 0.0 6.15444    
cufflinks 0.518       Low
cufflinks 0.858        
cufflinks 1.193        
cufflinks 0.628       Low
cufflinks 0.788        
cufflinks 1.098        
cufflinks 1.416        
cufflinks 0.465       Low
cufflinks 1.816       High
cufflinks 1.56        
cufflinks 1.57        
cufflinks 1.268        
cufflinks 1.905       High
cufflinks 1.173        
cufflinks 1.359        
cufflinks 1.48        
cufflinks 0.66       Low

0 Strain