Gene : Glyma.08G039000 G. max Wm82.a2.v1
Genomic Order:  390 Name:  ? Glyma.08G039000
Secondary Identifier:  ? PAC:30538074
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G039000 0.5kb upstream 0.5kb upstream 1014 true Chr08: 3052720-3053733 Glycine max
Glyma.08G039000 0.5kb upstream 0.5kb upstream 500 false Chr08: 3052720-3053219 Glycine max
Glyma.08G039000 0.5kb downstream 0.5kb downstream 1014 true Chr08: 3053220-3054233 Glycine max
Glyma.08G039000 0.5kb downstream 0.5kb downstream 500 false Chr08: 3053734-3054233 Glycine max
Glyma.08G039000 1.0kb upstream 1.0kb upstream 1514 true Chr08: 3052220-3053733 Glycine max
Glyma.08G039000 1.0kb upstream 1.0kb upstream 1000 false Chr08: 3052220-3053219 Glycine max
Glyma.08G039000 1.0kb downstream 1.0kb downstream 1514 true Chr08: 3053220-3054733 Glycine max
Glyma.08G039000 1.0kb downstream 1.0kb downstream 1000 false Chr08: 3053734-3054733 Glycine max
Glyma.08G039000 2.0kb upstream 2.0kb upstream 2514 true Chr08: 3051220-3053733 Glycine max
Glyma.08G039000 2.0kb upstream 2.0kb upstream 2000 false Chr08: 3051220-3053219 Glycine max
Glyma.08G039000 2.0kb downstream 2.0kb downstream 2514 true Chr08: 3053220-3055733 Glycine max
Glyma.08G039000 2.0kb downstream 2.0kb downstream 2000 false Chr08: 3053734-3055733 Glycine max
Glyma.08G039000 5.0kb upstream 5.0kb upstream 5514 true Chr08: 3048220-3053733 Glycine max
Glyma.08G039000 5.0kb upstream 5.0kb upstream 5000 false Chr08: 3048220-3053219 Glycine max
Glyma.08G039000 5.0kb downstream 5.0kb downstream 5514 true Chr08: 3053220-3058733 Glycine max
Glyma.08G039000 5.0kb downstream 5.0kb downstream 5000 false Chr08: 3053734-3058733 Glycine max
Glyma.08G039000 10.0kb upstream 10.0kb upstream 10514 true Chr08: 3043220-3053733 Glycine max
Glyma.08G039000 10.0kb upstream 10.0kb upstream 10000 false Chr08: 3043220-3053219 Glycine max
Glyma.08G039000 10.0kb downstream 10.0kb downstream 10514 true Chr08: 3053220-3063733 Glycine max
Glyma.08G039000 10.0kb downstream 10.0kb downstream 10000 false Chr08: 3053734-3063733 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311507 5265 Fabidae View MSA
124069859 5270 Rosid View MSA
123751970 5271 Pentapetalae View MSA
122796079 5272 Eudicot View MSA
122050175 5273 Angiosperm View MSA
121348989 5274 Embryophyte View MSA
123381114 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0654314 0.0 0.295915 Low Low
cufflinks 0.637076 0.0 2.50637    
cufflinks 0.910144 0.0 3.53811    
cufflinks 1.65965 0.0 6.27612    
cufflinks 2.62144 0.0 9.68751    
cufflinks 1.09576 0.0 4.21716    
cufflinks 2.17945 0.0 8.1355    
cufflinks 3.2602 0.0 11.9049    
cufflinks 2.69243 0.0 9.9342    
cufflinks 0.239        
cufflinks 0.194        
cufflinks 2.228       High
cufflinks 0.715        
cufflinks 1.066        
cufflinks 0.035     Low Low
cufflinks 0.381        
cufflinks 0.989        
cufflinks 10.389     High High
cufflinks 0.542        
cufflinks 0.275        
cufflinks 0.211        
cufflinks 0.192        
cufflinks 0.14        
cufflinks 0.143        
cufflinks 0.543        
cufflinks 0.28        

0 Strain