Gene : Glyma.08G039100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31791:SF10 - FRIGIDA-LIKE PROTEIN 1-RELATED Genomic Order:  391
Name:  ? Glyma.08G039100 Secondary Identifier:  ? PAC:30535754
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G039100 0.5kb upstream 0.5kb upstream 3879 true Chr08: 3056938-3060816 Glycine max
Glyma.08G039100 0.5kb upstream 0.5kb upstream 500 false Chr08: 3056938-3057437 Glycine max
Glyma.08G039100 0.5kb downstream 0.5kb downstream 3879 true Chr08: 3057438-3061316 Glycine max
Glyma.08G039100 0.5kb downstream 0.5kb downstream 500 false Chr08: 3060817-3061316 Glycine max
Glyma.08G039100 1.0kb upstream 1.0kb upstream 4379 true Chr08: 3056438-3060816 Glycine max
Glyma.08G039100 1.0kb upstream 1.0kb upstream 1000 false Chr08: 3056438-3057437 Glycine max
Glyma.08G039100 1.0kb downstream 1.0kb downstream 4379 true Chr08: 3057438-3061816 Glycine max
Glyma.08G039100 1.0kb downstream 1.0kb downstream 1000 false Chr08: 3060817-3061816 Glycine max
Glyma.08G039100 2.0kb upstream 2.0kb upstream 5379 true Chr08: 3055438-3060816 Glycine max
Glyma.08G039100 2.0kb upstream 2.0kb upstream 2000 false Chr08: 3055438-3057437 Glycine max
Glyma.08G039100 2.0kb downstream 2.0kb downstream 5379 true Chr08: 3057438-3062816 Glycine max
Glyma.08G039100 2.0kb downstream 2.0kb downstream 2000 false Chr08: 3060817-3062816 Glycine max
Glyma.08G039100 5.0kb upstream 5.0kb upstream 8379 true Chr08: 3052438-3060816 Glycine max
Glyma.08G039100 5.0kb upstream 5.0kb upstream 5000 false Chr08: 3052438-3057437 Glycine max
Glyma.08G039100 5.0kb downstream 5.0kb downstream 8379 true Chr08: 3057438-3065816 Glycine max
Glyma.08G039100 5.0kb downstream 5.0kb downstream 5000 false Chr08: 3060817-3065816 Glycine max
Glyma.08G039100 10.0kb upstream 10.0kb upstream 13379 true Chr08: 3047438-3060816 Glycine max
Glyma.08G039100 10.0kb upstream 10.0kb upstream 10000 false Chr08: 3047438-3057437 Glycine max
Glyma.08G039100 10.0kb downstream 10.0kb downstream 13379 true Chr08: 3057438-3070816 Glycine max
Glyma.08G039100 10.0kb downstream 10.0kb downstream 10000 false Chr08: 3060817-3070816 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301584 5265 Fabidae View MSA
124070962 5270 Rosid View MSA
123742663 5271 Pentapetalae View MSA
122794855 5272 Eudicot View MSA
122049727 5273 Angiosperm View MSA
121311561 5274 Embryophyte View MSA
123348841 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.74123 0.0 21.2802    
cufflinks 4.48373 0.0 20.8574    
cufflinks 4.44604 0.0 21.136    
cufflinks 6.397 0.0 27.5323   High
cufflinks 5.22238 0.0 22.6941    
cufflinks 3.93647 0.0 14.1654   Low
cufflinks 7.29367 0.0 29.8658   High
cufflinks 4.55226 0.0 20.9367    
cufflinks 4.15565 0.0 17.2473    
cufflinks 0.641        
cufflinks 0.168       Low
cufflinks 0.923        
cufflinks 0.873        
cufflinks 1.002       High
cufflinks 0.529        
cufflinks 0.601        
cufflinks 0.431        
cufflinks 0.996       High
cufflinks 1.067       High
cufflinks 0.594        
cufflinks 0.369        
cufflinks 0.639        
cufflinks 0.714        
cufflinks 0.264       Low
cufflinks 0.532        
cufflinks 0.253       Low

0 Strain