Gene : Glyma.08G020200 G. max Wm82.a2.v1
Defline:  (1 of 2) PF03417 - Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase (AAT) Genomic Order:  202
Name:  ? Glyma.08G020200 Secondary Identifier:  ? PAC:30539021
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G020200 0.5kb upstream 0.5kb upstream 6950 true Chr08: 1645078-1652027 Glycine max
Glyma.08G020200 0.5kb upstream 0.5kb upstream 500 false Chr08: 1651528-1652027 Glycine max
Glyma.08G020200 0.5kb downstream 0.5kb downstream 6950 true Chr08: 1644578-1651527 Glycine max
Glyma.08G020200 0.5kb downstream 0.5kb downstream 500 false Chr08: 1644578-1645077 Glycine max
Glyma.08G020200 1.0kb upstream 1.0kb upstream 7450 true Chr08: 1645078-1652527 Glycine max
Glyma.08G020200 1.0kb upstream 1.0kb upstream 1000 false Chr08: 1651528-1652527 Glycine max
Glyma.08G020200 1.0kb downstream 1.0kb downstream 7450 true Chr08: 1644078-1651527 Glycine max
Glyma.08G020200 1.0kb downstream 1.0kb downstream 1000 false Chr08: 1644078-1645077 Glycine max
Glyma.08G020200 2.0kb upstream 2.0kb upstream 8450 true Chr08: 1645078-1653527 Glycine max
Glyma.08G020200 2.0kb upstream 2.0kb upstream 2000 false Chr08: 1651528-1653527 Glycine max
Glyma.08G020200 2.0kb downstream 2.0kb downstream 8450 true Chr08: 1643078-1651527 Glycine max
Glyma.08G020200 2.0kb downstream 2.0kb downstream 2000 false Chr08: 1643078-1645077 Glycine max
Glyma.08G020200 5.0kb upstream 5.0kb upstream 11450 true Chr08: 1645078-1656527 Glycine max
Glyma.08G020200 5.0kb upstream 5.0kb upstream 5000 false Chr08: 1651528-1656527 Glycine max
Glyma.08G020200 5.0kb downstream 5.0kb downstream 11450 true Chr08: 1640078-1651527 Glycine max
Glyma.08G020200 5.0kb downstream 5.0kb downstream 5000 false Chr08: 1640078-1645077 Glycine max
Glyma.08G020200 10.0kb upstream 10.0kb upstream 16450 true Chr08: 1645078-1661527 Glycine max
Glyma.08G020200 10.0kb upstream 10.0kb upstream 10000 false Chr08: 1651528-1661527 Glycine max
Glyma.08G020200 10.0kb downstream 10.0kb downstream 16450 true Chr08: 1635078-1651527 Glycine max
Glyma.08G020200 10.0kb downstream 10.0kb downstream 10000 false Chr08: 1635078-1645077 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308149 5265 Fabidae View MSA
124070065 5270 Rosid View MSA
123742474 5271 Pentapetalae View MSA
122793918 5272 Eudicot View MSA
122048477 5273 Angiosperm View MSA
121348469 5274 Embryophyte View MSA
123380874 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.169828 0.0 0.664925 Low  
cufflinks 0.0631869 0.0 0.259698 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.295783 0.0 2.00507    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.69752 0.0 10.6264   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.456       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.055     Low  
cufflinks 0.001     Low Low
cufflinks 0.003     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.016     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.201       High
cufflinks 0.027     Low  
cufflinks 0.023     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.016     Low  
cufflinks 0.007     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.021     Low  
cufflinks 0.001     Low Low

0 Strain