Gene : Glyma.08G022500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11349:SF53 - NUCLEOSIDE DIPHOSPHATE KINASE-RELATED Genomic Order:  225
Name:  ? Glyma.08G022500 Secondary Identifier:  ? PAC:30537700
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Sequence Feature Displayer

Ontology Annotation Displayer

21 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY0-162 Glycine max pathologic  
Gmax PWY-6126 Glycine max pathologic  
Gmax PWY-6545 Glycine max pathologic  
Gmax PWY-7176 Glycine max pathologic  
Gmax PWY-7184 Glycine max pathologic  
Gmax PWY-7196 Glycine max pathologic  
Gmax PWY-7197 Glycine max pathologic  
Gmax PWY-7200 Glycine max pathologic  
Gmax PWY-7205 Glycine max pathologic  
Gmax PWY-7208 Glycine max pathologic  
Gmax PWY-7210 Glycine max pathologic  
Gmax PWY-7211 Glycine max pathologic  
Gmax PWY-7220 Glycine max pathologic  
Gmax PWY-7221 Glycine max pathologic  
Gmax PWY-7222 Glycine max pathologic  
Gmax PWY-7224 Glycine max pathologic  
Gmax PWY-7226 Glycine max pathologic  
Gmax PWY-7227 Glycine max pathologic  
Gmax PWY-7228 Glycine max pathologic  
Gmax PWY-7229 Glycine max pathologic  
Gmax PWY-841 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G022500 0.5kb upstream 0.5kb upstream 3279 true Chr08: 1811134-1814412 Glycine max
Glyma.08G022500 0.5kb upstream 0.5kb upstream 500 false Chr08: 1813913-1814412 Glycine max
Glyma.08G022500 0.5kb downstream 0.5kb downstream 3279 true Chr08: 1810634-1813912 Glycine max
Glyma.08G022500 0.5kb downstream 0.5kb downstream 500 false Chr08: 1810634-1811133 Glycine max
Glyma.08G022500 1.0kb upstream 1.0kb upstream 3779 true Chr08: 1811134-1814912 Glycine max
Glyma.08G022500 1.0kb upstream 1.0kb upstream 1000 false Chr08: 1813913-1814912 Glycine max
Glyma.08G022500 1.0kb downstream 1.0kb downstream 3779 true Chr08: 1810134-1813912 Glycine max
Glyma.08G022500 1.0kb downstream 1.0kb downstream 1000 false Chr08: 1810134-1811133 Glycine max
Glyma.08G022500 2.0kb upstream 2.0kb upstream 4779 true Chr08: 1811134-1815912 Glycine max
Glyma.08G022500 2.0kb upstream 2.0kb upstream 2000 false Chr08: 1813913-1815912 Glycine max
Glyma.08G022500 2.0kb downstream 2.0kb downstream 4779 true Chr08: 1809134-1813912 Glycine max
Glyma.08G022500 2.0kb downstream 2.0kb downstream 2000 false Chr08: 1809134-1811133 Glycine max
Glyma.08G022500 5.0kb upstream 5.0kb upstream 7779 true Chr08: 1811134-1818912 Glycine max
Glyma.08G022500 5.0kb upstream 5.0kb upstream 5000 false Chr08: 1813913-1818912 Glycine max
Glyma.08G022500 5.0kb downstream 5.0kb downstream 7779 true Chr08: 1806134-1813912 Glycine max
Glyma.08G022500 5.0kb downstream 5.0kb downstream 5000 false Chr08: 1806134-1811133 Glycine max
Glyma.08G022500 10.0kb upstream 10.0kb upstream 12779 true Chr08: 1811134-1823912 Glycine max
Glyma.08G022500 10.0kb upstream 10.0kb upstream 10000 false Chr08: 1813913-1823912 Glycine max
Glyma.08G022500 10.0kb downstream 10.0kb downstream 12779 true Chr08: 1801134-1813912 Glycine max
Glyma.08G022500 10.0kb downstream 10.0kb downstream 10000 false Chr08: 1801134-1811133 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312585 5265 Fabidae View MSA
124068099 5270 Rosid View MSA
123749251 5271 Pentapetalae View MSA
122792257 5272 Eudicot View MSA
122050213 5273 Angiosperm View MSA
123428962 5275 Viridiplantae View MSA
121346571 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 36.7493 0.0 98.3653 High  
cufflinks 97.1948 0.0 281.206 High  
cufflinks 32.1289 0.0 85.7921 High Low
cufflinks 44.3864 0.0 119.656 High  
cufflinks 153.498 0.0 477.327 High High
cufflinks 107.332 0.0 315.542 High  
cufflinks 45.4325 0.0 122.546 High  
cufflinks 32.2776 0.0 86.1959 High Low
cufflinks 89.4721 0.0 256.746 High  
cufflinks 32.382     High  
cufflinks 4.795       Low
cufflinks 18.956     High  
cufflinks 60.124     High High
cufflinks 83.488     High High
cufflinks 12.047     High  
cufflinks 17.843     High  
cufflinks 13.137     High  
cufflinks 46.26     High High
cufflinks 37.537     High  
cufflinks 13.703     High  
cufflinks 9.747     High  
cufflinks 14.203     High  
cufflinks 23.507     High  
cufflinks 3.881       Low
cufflinks 15.945     High  
cufflinks 11.872     High  

0 Strain