Gene : Glyma.08G024700 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR11712//PTHR11712:SF283 - POLYKETIDE SYNTHASE-RELATED Genomic Order:  247
Name:  ? Glyma.08G024700 Secondary Identifier:  ? PAC:30539765
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G024700 0.5kb upstream 0.5kb upstream 4122 true Chr08: 1954524-1958645 Glycine max
Glyma.08G024700 0.5kb upstream 0.5kb upstream 500 false Chr08: 1954524-1955023 Glycine max
Glyma.08G024700 0.5kb downstream 0.5kb downstream 4122 true Chr08: 1955024-1959145 Glycine max
Glyma.08G024700 0.5kb downstream 0.5kb downstream 500 false Chr08: 1958646-1959145 Glycine max
Glyma.08G024700 1.0kb upstream 1.0kb upstream 4622 true Chr08: 1954024-1958645 Glycine max
Glyma.08G024700 1.0kb upstream 1.0kb upstream 1000 false Chr08: 1954024-1955023 Glycine max
Glyma.08G024700 1.0kb downstream 1.0kb downstream 4622 true Chr08: 1955024-1959645 Glycine max
Glyma.08G024700 1.0kb downstream 1.0kb downstream 1000 false Chr08: 1958646-1959645 Glycine max
Glyma.08G024700 2.0kb upstream 2.0kb upstream 5622 true Chr08: 1953024-1958645 Glycine max
Glyma.08G024700 2.0kb upstream 2.0kb upstream 2000 false Chr08: 1953024-1955023 Glycine max
Glyma.08G024700 2.0kb downstream 2.0kb downstream 5622 true Chr08: 1955024-1960645 Glycine max
Glyma.08G024700 2.0kb downstream 2.0kb downstream 2000 false Chr08: 1958646-1960645 Glycine max
Glyma.08G024700 5.0kb upstream 5.0kb upstream 8622 true Chr08: 1950024-1958645 Glycine max
Glyma.08G024700 5.0kb upstream 5.0kb upstream 5000 false Chr08: 1950024-1955023 Glycine max
Glyma.08G024700 5.0kb downstream 5.0kb downstream 8622 true Chr08: 1955024-1963645 Glycine max
Glyma.08G024700 5.0kb downstream 5.0kb downstream 5000 false Chr08: 1958646-1963645 Glycine max
Glyma.08G024700 10.0kb upstream 10.0kb upstream 13622 true Chr08: 1945024-1958645 Glycine max
Glyma.08G024700 10.0kb upstream 10.0kb upstream 10000 false Chr08: 1945024-1955023 Glycine max
Glyma.08G024700 10.0kb downstream 10.0kb downstream 13622 true Chr08: 1955024-1968645 Glycine max
Glyma.08G024700 10.0kb downstream 10.0kb downstream 10000 false Chr08: 1958646-1968645 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791871 5273 Angiosperm View MSA
122303640 5265 Fabidae View MSA
124070381 5270 Rosid View MSA
123742517 5271 Pentapetalae View MSA
122794938 5272 Eudicot View MSA
121063147 5274 Embryophyte View MSA
123426303 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0506922 0.0 0.207106 Low Low
cufflinks 17.1921 0.0 59.2459   High
cufflinks 0.842112 0.0 4.85739    
cufflinks 1.35779 0.0 7.13633    
cufflinks 1.55112 0.0 5.7384    
cufflinks 6.03994 0.0 20.1905    
cufflinks 2.01182 0.0 9.45117    
cufflinks 2.75686 0.0 11.432    
cufflinks 1.98288 0.0 9.06294    
cufflinks 0.71        
cufflinks 0.076       Low
cufflinks 0.517        
cufflinks 0.065     Low Low
cufflinks 0.043     Low Low
cufflinks 0.091       Low
cufflinks 1.66        
cufflinks 1.895       High
cufflinks 1.002        
cufflinks 7.418       High
cufflinks 0.428        
cufflinks 0.354        
cufflinks 0.712        
cufflinks 1.175        
cufflinks 0.076       Low
cufflinks 0.978        
cufflinks 0.635        

0 Strain