Gene : Glyma.08G013600 G. max Wm82.a2.v1
Defline:  (1 of 6) PF00122//PF12710 - E1-E2 ATPase (E1-E2_ATPase) // haloacid dehalogenase-like hydrolase (HAD) Genomic Order:  136
Name:  ? Glyma.08G013600 Secondary Identifier:  ? PAC:30537087
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G013600 0.5kb upstream 0.5kb upstream 3583 true Chr08: 1066782-1070364 Glycine max
Glyma.08G013600 0.5kb upstream 0.5kb upstream 500 false Chr08: 1066782-1067281 Glycine max
Glyma.08G013600 0.5kb downstream 0.5kb downstream 3583 true Chr08: 1067282-1070864 Glycine max
Glyma.08G013600 0.5kb downstream 0.5kb downstream 500 false Chr08: 1070365-1070864 Glycine max
Glyma.08G013600 1.0kb upstream 1.0kb upstream 4083 true Chr08: 1066282-1070364 Glycine max
Glyma.08G013600 1.0kb upstream 1.0kb upstream 1000 false Chr08: 1066282-1067281 Glycine max
Glyma.08G013600 1.0kb downstream 1.0kb downstream 4083 true Chr08: 1067282-1071364 Glycine max
Glyma.08G013600 1.0kb downstream 1.0kb downstream 1000 false Chr08: 1070365-1071364 Glycine max
Glyma.08G013600 2.0kb upstream 2.0kb upstream 5083 true Chr08: 1065282-1070364 Glycine max
Glyma.08G013600 2.0kb upstream 2.0kb upstream 2000 false Chr08: 1065282-1067281 Glycine max
Glyma.08G013600 2.0kb downstream 2.0kb downstream 5083 true Chr08: 1067282-1072364 Glycine max
Glyma.08G013600 2.0kb downstream 2.0kb downstream 2000 false Chr08: 1070365-1072364 Glycine max
Glyma.08G013600 5.0kb upstream 5.0kb upstream 8083 true Chr08: 1062282-1070364 Glycine max
Glyma.08G013600 5.0kb upstream 5.0kb upstream 5000 false Chr08: 1062282-1067281 Glycine max
Glyma.08G013600 5.0kb downstream 5.0kb downstream 8083 true Chr08: 1067282-1075364 Glycine max
Glyma.08G013600 5.0kb downstream 5.0kb downstream 5000 false Chr08: 1070365-1075364 Glycine max
Glyma.08G013600 10.0kb upstream 10.0kb upstream 13083 true Chr08: 1057282-1070364 Glycine max
Glyma.08G013600 10.0kb upstream 10.0kb upstream 10000 false Chr08: 1057282-1067281 Glycine max
Glyma.08G013600 10.0kb downstream 10.0kb downstream 13083 true Chr08: 1067282-1080364 Glycine max
Glyma.08G013600 10.0kb downstream 10.0kb downstream 10000 false Chr08: 1070365-1080364 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122316057 5265 Fabidae View MSA
124074915 5270 Rosid View MSA
123753356 5271 Pentapetalae View MSA
122796910 5272 Eudicot View MSA
122047959 5273 Angiosperm View MSA
121350289 5274 Embryophyte View MSA
123427971 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.00891635 0.0 0.0399353 Low  
cufflinks 0.0261119 0.0 0.107647 Low  
cufflinks 0.00682506 0.0 0.0312282 Low  
cufflinks 0.0174815 0.0 0.074015 Low  
cufflinks 14.65 0.0 39.1732   High
cufflinks 0.153251 0.0 0.586272 Low  
cufflinks 0.175091 0.0 0.666406 Low  
cufflinks 0.00377403 0.0 0.0184412 Low Low
cufflinks 1.00883 0.0 3.42654    
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.129        
cufflinks 0.005     Low  
cufflinks 0.052     Low  
cufflinks 0.014     Low  
cufflinks 0.013     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 28.376     High High
cufflinks 0.05     Low  
cufflinks 0.004     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.368        
cufflinks 0.005     Low  
cufflinks 0.006     Low  
cufflinks 0.225        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.337        

0 Strain