Gene : Glyma.08G060700 G. max Wm82.a2.v1
Defline:  (1 of 51) 3.2.1.4 - Cellulase / Endoglucanase Genomic Order:  607
Name:  ? Glyma.08G060700 Secondary Identifier:  ? PAC:30538500
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G060700 0.5kb upstream 0.5kb upstream 3155 true Chr08: 4677376-4680530 Glycine max
Glyma.08G060700 0.5kb upstream 0.5kb upstream 500 false Chr08: 4680031-4680530 Glycine max
Glyma.08G060700 0.5kb downstream 0.5kb downstream 3155 true Chr08: 4676876-4680030 Glycine max
Glyma.08G060700 0.5kb downstream 0.5kb downstream 500 false Chr08: 4676876-4677375 Glycine max
Glyma.08G060700 1.0kb upstream 1.0kb upstream 3655 true Chr08: 4677376-4681030 Glycine max
Glyma.08G060700 1.0kb upstream 1.0kb upstream 1000 false Chr08: 4680031-4681030 Glycine max
Glyma.08G060700 1.0kb downstream 1.0kb downstream 3655 true Chr08: 4676376-4680030 Glycine max
Glyma.08G060700 1.0kb downstream 1.0kb downstream 1000 false Chr08: 4676376-4677375 Glycine max
Glyma.08G060700 2.0kb upstream 2.0kb upstream 4655 true Chr08: 4677376-4682030 Glycine max
Glyma.08G060700 2.0kb upstream 2.0kb upstream 2000 false Chr08: 4680031-4682030 Glycine max
Glyma.08G060700 2.0kb downstream 2.0kb downstream 4655 true Chr08: 4675376-4680030 Glycine max
Glyma.08G060700 2.0kb downstream 2.0kb downstream 2000 false Chr08: 4675376-4677375 Glycine max
Glyma.08G060700 5.0kb upstream 5.0kb upstream 7655 true Chr08: 4677376-4685030 Glycine max
Glyma.08G060700 5.0kb upstream 5.0kb upstream 5000 false Chr08: 4680031-4685030 Glycine max
Glyma.08G060700 5.0kb downstream 5.0kb downstream 7655 true Chr08: 4672376-4680030 Glycine max
Glyma.08G060700 5.0kb downstream 5.0kb downstream 5000 false Chr08: 4672376-4677375 Glycine max
Glyma.08G060700 10.0kb upstream 10.0kb upstream 12655 true Chr08: 4677376-4690030 Glycine max
Glyma.08G060700 10.0kb upstream 10.0kb upstream 10000 false Chr08: 4680031-4690030 Glycine max
Glyma.08G060700 10.0kb downstream 10.0kb downstream 12655 true Chr08: 4667376-4680030 Glycine max
Glyma.08G060700 10.0kb downstream 10.0kb downstream 10000 false Chr08: 4667376-4677375 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122031669 5273 Angiosperm View MSA
122297064 5265 Fabidae View MSA
124070435 5270 Rosid View MSA
123747518 5271 Pentapetalae View MSA
122798100 5272 Eudicot View MSA
121351116 5274 Embryophyte View MSA
123426514 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.990365 0.0 3.55989    
cufflinks 0.788198 0.0 2.8721    
cufflinks 1.79023 0.0 6.10542   High
cufflinks 0.662665 0.0 2.43859    
cufflinks 0.0775829 0.0 0.312636 Low Low
cufflinks 0.0849686 0.0 0.341102 Low Low
cufflinks 0.211091 0.0 0.818859    
cufflinks 0.528698 0.0 1.96677    
cufflinks 0.149341 0.0 0.586934 Low  
cufflinks 0.097     Low  
cufflinks 0.177        
cufflinks 1.322       High
cufflinks 0.071     Low  
cufflinks 0.007     Low Low
cufflinks 0.092        
cufflinks 0.575        
cufflinks 0.047     Low Low
cufflinks 1.65       High
cufflinks 0.431        
cufflinks 0.602        
cufflinks 0.196        
cufflinks 0.775        
cufflinks 0.5        
cufflinks 0.351        
cufflinks 0.445        
cufflinks 0.088        

0 Strain