Gene : Glyma.08G063500 G. max Wm82.a2.v1
Defline:  (1 of 6) 2.6.1.83 - LL-diaminopimelate aminotransferase / LL-diaminopimelate transaminase Genomic Order:  635
Name:  ? Glyma.08G063500 Secondary Identifier:  ? PAC:30536115
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5097 Glycine max pathologic  
Gmax PWY-724 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G063500 0.5kb upstream 0.5kb upstream 6708 true Chr08: 4876158-4882865 Glycine max
Glyma.08G063500 0.5kb upstream 0.5kb upstream 500 false Chr08: 4876158-4876657 Glycine max
Glyma.08G063500 0.5kb downstream 0.5kb downstream 6708 true Chr08: 4876658-4883365 Glycine max
Glyma.08G063500 0.5kb downstream 0.5kb downstream 500 false Chr08: 4882866-4883365 Glycine max
Glyma.08G063500 1.0kb upstream 1.0kb upstream 7208 true Chr08: 4875658-4882865 Glycine max
Glyma.08G063500 1.0kb upstream 1.0kb upstream 1000 false Chr08: 4875658-4876657 Glycine max
Glyma.08G063500 1.0kb downstream 1.0kb downstream 7208 true Chr08: 4876658-4883865 Glycine max
Glyma.08G063500 1.0kb downstream 1.0kb downstream 1000 false Chr08: 4882866-4883865 Glycine max
Glyma.08G063500 2.0kb upstream 2.0kb upstream 8208 true Chr08: 4874658-4882865 Glycine max
Glyma.08G063500 2.0kb upstream 2.0kb upstream 2000 false Chr08: 4874658-4876657 Glycine max
Glyma.08G063500 2.0kb downstream 2.0kb downstream 8208 true Chr08: 4876658-4884865 Glycine max
Glyma.08G063500 2.0kb downstream 2.0kb downstream 2000 false Chr08: 4882866-4884865 Glycine max
Glyma.08G063500 5.0kb upstream 5.0kb upstream 11208 true Chr08: 4871658-4882865 Glycine max
Glyma.08G063500 5.0kb upstream 5.0kb upstream 5000 false Chr08: 4871658-4876657 Glycine max
Glyma.08G063500 5.0kb downstream 5.0kb downstream 11208 true Chr08: 4876658-4887865 Glycine max
Glyma.08G063500 5.0kb downstream 5.0kb downstream 5000 false Chr08: 4882866-4887865 Glycine max
Glyma.08G063500 10.0kb upstream 10.0kb upstream 16208 true Chr08: 4866658-4882865 Glycine max
Glyma.08G063500 10.0kb upstream 10.0kb upstream 10000 false Chr08: 4866658-4876657 Glycine max
Glyma.08G063500 10.0kb downstream 10.0kb downstream 16208 true Chr08: 4876658-4892865 Glycine max
Glyma.08G063500 10.0kb downstream 10.0kb downstream 10000 false Chr08: 4882866-4892865 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308079 5265 Fabidae View MSA
124071170 5270 Rosid View MSA
123740014 5271 Pentapetalae View MSA
122788260 5272 Eudicot View MSA
122045161 5273 Angiosperm View MSA
121344343 5274 Embryophyte View MSA
123424947 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 36.8357 0.0 101.073 High  
cufflinks 44.7563 0.0 125.149 High  
cufflinks 31.6499 0.0 86.1493 High  
cufflinks 49.4419 0.0 139.926 High  
cufflinks 57.8616 0.0 166.67 High  
cufflinks 46.3184 0.0 129.896 High  
cufflinks 103.64 0.0 327.765 High High
cufflinks 36.5049 0.0 100.26 High  
cufflinks 29.8011 0.0 80.6922 High Low
cufflinks 11.622     High  
cufflinks 0.594       Low
cufflinks 10.011     High  
cufflinks 16.842     High  
cufflinks 21.702     High High
cufflinks 1.121       Low
cufflinks 11.49     High  
cufflinks 3.681        
cufflinks 9.122     High  
cufflinks 12.917     High  
cufflinks 8.33     High  
cufflinks 1.152       Low
cufflinks 8.96     High  
cufflinks 13.294     High  
cufflinks 0.658       Low
cufflinks 10.217     High  
cufflinks 3.115        

0 Strain