Gene : Glyma.08G052600 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR11467//PTHR11467:SF33 - HISTONE H1/H5 Genomic Order:  526
Name:  ? Glyma.08G052600 Secondary Identifier:  ? PAC:30537716
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G052600 0.5kb upstream 0.5kb upstream 3610 true Chr08: 4076457-4080066 Glycine max
Glyma.08G052600 0.5kb upstream 0.5kb upstream 500 false Chr08: 4076457-4076956 Glycine max
Glyma.08G052600 0.5kb downstream 0.5kb downstream 3610 true Chr08: 4076957-4080566 Glycine max
Glyma.08G052600 0.5kb downstream 0.5kb downstream 500 false Chr08: 4080067-4080566 Glycine max
Glyma.08G052600 1.0kb upstream 1.0kb upstream 4110 true Chr08: 4075957-4080066 Glycine max
Glyma.08G052600 1.0kb upstream 1.0kb upstream 1000 false Chr08: 4075957-4076956 Glycine max
Glyma.08G052600 1.0kb downstream 1.0kb downstream 4110 true Chr08: 4076957-4081066 Glycine max
Glyma.08G052600 1.0kb downstream 1.0kb downstream 1000 false Chr08: 4080067-4081066 Glycine max
Glyma.08G052600 2.0kb upstream 2.0kb upstream 5110 true Chr08: 4074957-4080066 Glycine max
Glyma.08G052600 2.0kb upstream 2.0kb upstream 2000 false Chr08: 4074957-4076956 Glycine max
Glyma.08G052600 2.0kb downstream 2.0kb downstream 5110 true Chr08: 4076957-4082066 Glycine max
Glyma.08G052600 2.0kb downstream 2.0kb downstream 2000 false Chr08: 4080067-4082066 Glycine max
Glyma.08G052600 5.0kb upstream 5.0kb upstream 8110 true Chr08: 4071957-4080066 Glycine max
Glyma.08G052600 5.0kb upstream 5.0kb upstream 5000 false Chr08: 4071957-4076956 Glycine max
Glyma.08G052600 5.0kb downstream 5.0kb downstream 8110 true Chr08: 4076957-4085066 Glycine max
Glyma.08G052600 5.0kb downstream 5.0kb downstream 5000 false Chr08: 4080067-4085066 Glycine max
Glyma.08G052600 10.0kb upstream 10.0kb upstream 13110 true Chr08: 4066957-4080066 Glycine max
Glyma.08G052600 10.0kb upstream 10.0kb upstream 10000 false Chr08: 4066957-4076956 Glycine max
Glyma.08G052600 10.0kb downstream 10.0kb downstream 13110 true Chr08: 4076957-4090066 Glycine max
Glyma.08G052600 10.0kb downstream 10.0kb downstream 10000 false Chr08: 4080067-4090066 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029847 5273 Angiosperm View MSA
122311965 5265 Fabidae View MSA
124072577 5270 Rosid View MSA
123747528 5271 Pentapetalae View MSA
122795088 5272 Eudicot View MSA
121350617 5274 Embryophyte View MSA
123428771 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.1632 0.0 65.0642 High  
cufflinks 26.9887 0.0 72.9042 High  
cufflinks 50.8656 0.0 144.668 High High
cufflinks 21.2269 0.0 56.839 High  
cufflinks 24.8649 0.0 67.2284 High  
cufflinks 17.4304 0.0 46.5309    
cufflinks 12.568 0.0 33.5989   Low
cufflinks 19.2656 0.0 51.5013    
cufflinks 23.8883 0.0 64.298 High  
cufflinks 10.003     High  
cufflinks 10.584     High  
cufflinks 13.024     High  
cufflinks 14.037     High  
cufflinks 13.755     High  
cufflinks 7.536     High Low
cufflinks 17.962     High High
cufflinks 7.183     High Low
cufflinks 6.271       Low
cufflinks 20.691     High High
cufflinks 13.36     High  
cufflinks 13.95     High  
cufflinks 14.885     High  
cufflinks 21.222     High High
cufflinks 11.754     High  
cufflinks 13.373     High  
cufflinks 9.741     High  

0 Strain