Gene : Glyma.08G054500 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR23180:SF290 - C2 DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  545
Name:  ? Glyma.08G054500 Secondary Identifier:  ? PAC:30539386
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G054500 0.5kb upstream 0.5kb upstream 1797 true Chr08: 4206738-4208534 Glycine max
Glyma.08G054500 0.5kb upstream 0.5kb upstream 500 false Chr08: 4206738-4207237 Glycine max
Glyma.08G054500 0.5kb downstream 0.5kb downstream 1797 true Chr08: 4207238-4209034 Glycine max
Glyma.08G054500 0.5kb downstream 0.5kb downstream 500 false Chr08: 4208535-4209034 Glycine max
Glyma.08G054500 1.0kb upstream 1.0kb upstream 2297 true Chr08: 4206238-4208534 Glycine max
Glyma.08G054500 1.0kb upstream 1.0kb upstream 1000 false Chr08: 4206238-4207237 Glycine max
Glyma.08G054500 1.0kb downstream 1.0kb downstream 2297 true Chr08: 4207238-4209534 Glycine max
Glyma.08G054500 1.0kb downstream 1.0kb downstream 1000 false Chr08: 4208535-4209534 Glycine max
Glyma.08G054500 2.0kb upstream 2.0kb upstream 3297 true Chr08: 4205238-4208534 Glycine max
Glyma.08G054500 2.0kb upstream 2.0kb upstream 2000 false Chr08: 4205238-4207237 Glycine max
Glyma.08G054500 2.0kb downstream 2.0kb downstream 3297 true Chr08: 4207238-4210534 Glycine max
Glyma.08G054500 2.0kb downstream 2.0kb downstream 2000 false Chr08: 4208535-4210534 Glycine max
Glyma.08G054500 5.0kb upstream 5.0kb upstream 6297 true Chr08: 4202238-4208534 Glycine max
Glyma.08G054500 5.0kb upstream 5.0kb upstream 5000 false Chr08: 4202238-4207237 Glycine max
Glyma.08G054500 5.0kb downstream 5.0kb downstream 6297 true Chr08: 4207238-4213534 Glycine max
Glyma.08G054500 5.0kb downstream 5.0kb downstream 5000 false Chr08: 4208535-4213534 Glycine max
Glyma.08G054500 10.0kb upstream 10.0kb upstream 11297 true Chr08: 4197238-4208534 Glycine max
Glyma.08G054500 10.0kb upstream 10.0kb upstream 10000 false Chr08: 4197238-4207237 Glycine max
Glyma.08G054500 10.0kb downstream 10.0kb downstream 11297 true Chr08: 4207238-4218534 Glycine max
Glyma.08G054500 10.0kb downstream 10.0kb downstream 10000 false Chr08: 4208535-4218534 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311894 5265 Fabidae View MSA
124069795 5270 Rosid View MSA
123747243 5271 Pentapetalae View MSA
122796022 5272 Eudicot View MSA
122048793 5273 Angiosperm View MSA
121311115 5274 Embryophyte View MSA
123348457 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 136.171 0.0 400.668 High High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.064278 0.0 0.268993 Low  
cufflinks 0.377614 0.0 1.46095    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.295666 0.0 1.15445    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.012     Low  
cufflinks 0.056        
cufflinks 25.205     High High
cufflinks 0.06     Low  
cufflinks 0.028     Low  
cufflinks 0.058        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.022     Low  
cufflinks 30.327     High High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.015     Low  
cufflinks 0.032     Low  
cufflinks 0.017     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.029     Low  
cufflinks 0.017     Low  
cufflinks 0.091        

0 Strain