Gene : Glyma.08G056200 G. max Wm82.a2.v1
Defline:  (1 of 16) PF05542 - Protein of unknown function (DUF760) (DUF760) Genomic Order:  562
Name:  ? Glyma.08G056200 Secondary Identifier:  ? PAC:30541393
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G056200 0.5kb upstream 0.5kb upstream 2811 true Chr08: 4321853-4324663 Glycine max
Glyma.08G056200 0.5kb upstream 0.5kb upstream 500 false Chr08: 4324164-4324663 Glycine max
Glyma.08G056200 0.5kb downstream 0.5kb downstream 2811 true Chr08: 4321353-4324163 Glycine max
Glyma.08G056200 0.5kb downstream 0.5kb downstream 500 false Chr08: 4321353-4321852 Glycine max
Glyma.08G056200 1.0kb upstream 1.0kb upstream 3311 true Chr08: 4321853-4325163 Glycine max
Glyma.08G056200 1.0kb upstream 1.0kb upstream 1000 false Chr08: 4324164-4325163 Glycine max
Glyma.08G056200 1.0kb downstream 1.0kb downstream 3311 true Chr08: 4320853-4324163 Glycine max
Glyma.08G056200 1.0kb downstream 1.0kb downstream 1000 false Chr08: 4320853-4321852 Glycine max
Glyma.08G056200 2.0kb upstream 2.0kb upstream 4311 true Chr08: 4321853-4326163 Glycine max
Glyma.08G056200 2.0kb upstream 2.0kb upstream 2000 false Chr08: 4324164-4326163 Glycine max
Glyma.08G056200 2.0kb downstream 2.0kb downstream 4311 true Chr08: 4319853-4324163 Glycine max
Glyma.08G056200 2.0kb downstream 2.0kb downstream 2000 false Chr08: 4319853-4321852 Glycine max
Glyma.08G056200 5.0kb upstream 5.0kb upstream 7311 true Chr08: 4321853-4329163 Glycine max
Glyma.08G056200 5.0kb upstream 5.0kb upstream 5000 false Chr08: 4324164-4329163 Glycine max
Glyma.08G056200 5.0kb downstream 5.0kb downstream 7311 true Chr08: 4316853-4324163 Glycine max
Glyma.08G056200 5.0kb downstream 5.0kb downstream 5000 false Chr08: 4316853-4321852 Glycine max
Glyma.08G056200 10.0kb upstream 10.0kb upstream 12311 true Chr08: 4321853-4334163 Glycine max
Glyma.08G056200 10.0kb upstream 10.0kb upstream 10000 false Chr08: 4324164-4334163 Glycine max
Glyma.08G056200 10.0kb downstream 10.0kb downstream 12311 true Chr08: 4311853-4324163 Glycine max
Glyma.08G056200 10.0kb downstream 10.0kb downstream 10000 false Chr08: 4311853-4321852 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299022 5265 Fabidae View MSA
124062530 5270 Rosid View MSA
123743837 5271 Pentapetalae View MSA
122792166 5272 Eudicot View MSA
122045353 5273 Angiosperm View MSA
121310438 5274 Embryophyte View MSA
123428654 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 277.468 0.0 1126.32 High High
cufflinks 25.0828 0.0 67.4208 High  
cufflinks 67.9991 0.0 201.654 High  
cufflinks 16.7752 0.0 44.7552    
cufflinks 18.4468 0.0 49.2228    
cufflinks 31.9476 0.0 86.9603 High  
cufflinks 14.9931 0.0 40.0542    
cufflinks 17.3162 0.0 46.1981    
cufflinks 20.8119 0.0 55.6325 High  
cufflinks 14.098     High Low
cufflinks 45.143     High High
cufflinks 46.127     High High
cufflinks 13.322     High Low
cufflinks 9.356     High Low
cufflinks 40.538     High  
cufflinks 23.546     High  
cufflinks 29.701     High  
cufflinks 18.16     High  
cufflinks 24.754     High  
cufflinks 18.359     High  
cufflinks 54.152     High High
cufflinks 27.21     High  
cufflinks 26.685     High  
cufflinks 36.339     High  
cufflinks 19.437     High  
cufflinks 44.74     High High

0 Strain