Gene : Glyma.08G044600 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR22781 - DELTA ADAPTIN-RELATED Genomic Order:  446
Name:  ? Glyma.08G044600 Secondary Identifier:  ? PAC:30539895
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G044600 0.5kb upstream 0.5kb upstream 3477 true Chr08: 3526526-3530002 Glycine max
Glyma.08G044600 0.5kb upstream 0.5kb upstream 500 false Chr08: 3529503-3530002 Glycine max
Glyma.08G044600 0.5kb downstream 0.5kb downstream 3477 true Chr08: 3526026-3529502 Glycine max
Glyma.08G044600 0.5kb downstream 0.5kb downstream 500 false Chr08: 3526026-3526525 Glycine max
Glyma.08G044600 1.0kb upstream 1.0kb upstream 3977 true Chr08: 3526526-3530502 Glycine max
Glyma.08G044600 1.0kb upstream 1.0kb upstream 1000 false Chr08: 3529503-3530502 Glycine max
Glyma.08G044600 1.0kb downstream 1.0kb downstream 3977 true Chr08: 3525526-3529502 Glycine max
Glyma.08G044600 1.0kb downstream 1.0kb downstream 1000 false Chr08: 3525526-3526525 Glycine max
Glyma.08G044600 2.0kb upstream 2.0kb upstream 4977 true Chr08: 3526526-3531502 Glycine max
Glyma.08G044600 2.0kb upstream 2.0kb upstream 2000 false Chr08: 3529503-3531502 Glycine max
Glyma.08G044600 2.0kb downstream 2.0kb downstream 4977 true Chr08: 3524526-3529502 Glycine max
Glyma.08G044600 2.0kb downstream 2.0kb downstream 2000 false Chr08: 3524526-3526525 Glycine max
Glyma.08G044600 5.0kb upstream 5.0kb upstream 7977 true Chr08: 3526526-3534502 Glycine max
Glyma.08G044600 5.0kb upstream 5.0kb upstream 5000 false Chr08: 3529503-3534502 Glycine max
Glyma.08G044600 5.0kb downstream 5.0kb downstream 7977 true Chr08: 3521526-3529502 Glycine max
Glyma.08G044600 5.0kb downstream 5.0kb downstream 5000 false Chr08: 3521526-3526525 Glycine max
Glyma.08G044600 10.0kb upstream 10.0kb upstream 12977 true Chr08: 3526526-3539502 Glycine max
Glyma.08G044600 10.0kb upstream 10.0kb upstream 10000 false Chr08: 3529503-3539502 Glycine max
Glyma.08G044600 10.0kb downstream 10.0kb downstream 12977 true Chr08: 3516526-3529502 Glycine max
Glyma.08G044600 10.0kb downstream 10.0kb downstream 10000 false Chr08: 3516526-3526525 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122248630 5265 Fabidae Singleton cluster - no MSA
124067978 5270 Rosid View MSA
123739390 5271 Pentapetalae View MSA
122790341 5272 Eudicot View MSA
122043871 5273 Angiosperm View MSA
121345031 5274 Embryophyte View MSA
123425395 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.06879 0.0 16.4278    
cufflinks 6.18529 0.0 16.7308    
cufflinks 6.59081 0.0 17.7658    
cufflinks 7.56952 0.0 20.2975   High
cufflinks 7.70454 0.0 20.6415   High
cufflinks 6.84306 0.0 18.4087    
cufflinks 5.54224 0.0 15.076   Low
cufflinks 6.29033 0.0 16.9897    
cufflinks 6.16215 0.0 16.6574    
cufflinks 6.814       Low
cufflinks 7.285     High  
cufflinks 7.868     High  
cufflinks 8.732     High  
cufflinks 9.234     High  
cufflinks 8.065     High  
cufflinks 10.204     High High
cufflinks 5.991       Low
cufflinks 8.344     High  
cufflinks 9.713     High High
cufflinks 10.133     High High
cufflinks 7.456     High  
cufflinks 9.802     High High
cufflinks 7.132        
cufflinks 8.072     High  
cufflinks 9.78     High High
cufflinks 7.936     High  

0 Strain