Gene : Glyma.08G086600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR23076//PTHR23076:SF60 - METALLOPROTEASE M41 FTSH Genomic Order:  866
Name:  ? Glyma.08G086600 Secondary Identifier:  ? PAC:30537434
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G086600 0.5kb upstream 0.5kb upstream 4124 true Chr08: 6550226-6554349 Glycine max
Glyma.08G086600 0.5kb upstream 0.5kb upstream 500 false Chr08: 6553850-6554349 Glycine max
Glyma.08G086600 0.5kb downstream 0.5kb downstream 4124 true Chr08: 6549726-6553849 Glycine max
Glyma.08G086600 0.5kb downstream 0.5kb downstream 500 false Chr08: 6549726-6550225 Glycine max
Glyma.08G086600 1.0kb upstream 1.0kb upstream 4624 true Chr08: 6550226-6554849 Glycine max
Glyma.08G086600 1.0kb upstream 1.0kb upstream 1000 false Chr08: 6553850-6554849 Glycine max
Glyma.08G086600 1.0kb downstream 1.0kb downstream 4624 true Chr08: 6549226-6553849 Glycine max
Glyma.08G086600 1.0kb downstream 1.0kb downstream 1000 false Chr08: 6549226-6550225 Glycine max
Glyma.08G086600 2.0kb upstream 2.0kb upstream 5624 true Chr08: 6550226-6555849 Glycine max
Glyma.08G086600 2.0kb upstream 2.0kb upstream 2000 false Chr08: 6553850-6555849 Glycine max
Glyma.08G086600 2.0kb downstream 2.0kb downstream 5624 true Chr08: 6548226-6553849 Glycine max
Glyma.08G086600 2.0kb downstream 2.0kb downstream 2000 false Chr08: 6548226-6550225 Glycine max
Glyma.08G086600 5.0kb upstream 5.0kb upstream 8624 true Chr08: 6550226-6558849 Glycine max
Glyma.08G086600 5.0kb upstream 5.0kb upstream 5000 false Chr08: 6553850-6558849 Glycine max
Glyma.08G086600 5.0kb downstream 5.0kb downstream 8624 true Chr08: 6545226-6553849 Glycine max
Glyma.08G086600 5.0kb downstream 5.0kb downstream 5000 false Chr08: 6545226-6550225 Glycine max
Glyma.08G086600 10.0kb upstream 10.0kb upstream 13624 true Chr08: 6550226-6563849 Glycine max
Glyma.08G086600 10.0kb upstream 10.0kb upstream 10000 false Chr08: 6553850-6563849 Glycine max
Glyma.08G086600 10.0kb downstream 10.0kb downstream 13624 true Chr08: 6540226-6553849 Glycine max
Glyma.08G086600 10.0kb downstream 10.0kb downstream 10000 false Chr08: 6540226-6550225 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314772 5265 Fabidae View MSA
124067047 5270 Rosid View MSA
123736542 5271 Pentapetalae View MSA
122790199 5272 Eudicot View MSA
122046550 5273 Angiosperm View MSA
121351325 5274 Embryophyte View MSA
123426403 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 188.44 0.0 784.642 High High
cufflinks 29.8081 0.0 83.9287 High  
cufflinks 33.1168 0.0 94.8969 High  
cufflinks 30.6977 0.0 86.9252 High  
cufflinks 7.11128 0.0 19.1605    
cufflinks 19.3192 0.0 52.4418    
cufflinks 14.0144 0.0 37.5016    
cufflinks 13.8961 0.0 37.2018    
cufflinks 3.39797 0.0 9.70877   Low
cufflinks 14.114     High  
cufflinks 1.36       Low
cufflinks 39.761     High  
cufflinks 19.779     High  
cufflinks 10.268     High  
cufflinks 0.437       Low
cufflinks 87.022     High High
cufflinks 1.557       Low
cufflinks 27.731     High  
cufflinks 23.01     High  
cufflinks 94.75     High High
cufflinks 2.65        
cufflinks 96.277     High High
cufflinks 61.237     High  
cufflinks 1.692       Low
cufflinks 99.117     High High
cufflinks 2.886        

0 Strain