Gene : Glyma.08G087300 G. max Wm82.a2.v1
Defline:  (1 of 10) PF00122//PF00403//PF12710 - E1-E2 ATPase (E1-E2_ATPase) // Heavy-metal-associated domain (HMA) // haloacid dehalogenase-like hydrolase (HAD) Genomic Order:  873
Name:  ? Glyma.08G087300 Secondary Identifier:  ? PAC:30537480
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G087300 0.5kb upstream 0.5kb upstream 6126 true Chr08: 6604884-6611009 Glycine max
Glyma.08G087300 0.5kb upstream 0.5kb upstream 500 false Chr08: 6604884-6605383 Glycine max
Glyma.08G087300 0.5kb downstream 0.5kb downstream 6126 true Chr08: 6605384-6611509 Glycine max
Glyma.08G087300 0.5kb downstream 0.5kb downstream 500 false Chr08: 6611010-6611509 Glycine max
Glyma.08G087300 1.0kb upstream 1.0kb upstream 6626 true Chr08: 6604384-6611009 Glycine max
Glyma.08G087300 1.0kb upstream 1.0kb upstream 1000 false Chr08: 6604384-6605383 Glycine max
Glyma.08G087300 1.0kb downstream 1.0kb downstream 6626 true Chr08: 6605384-6612009 Glycine max
Glyma.08G087300 1.0kb downstream 1.0kb downstream 1000 false Chr08: 6611010-6612009 Glycine max
Glyma.08G087300 2.0kb upstream 2.0kb upstream 7626 true Chr08: 6603384-6611009 Glycine max
Glyma.08G087300 2.0kb upstream 2.0kb upstream 2000 false Chr08: 6603384-6605383 Glycine max
Glyma.08G087300 2.0kb downstream 2.0kb downstream 7626 true Chr08: 6605384-6613009 Glycine max
Glyma.08G087300 2.0kb downstream 2.0kb downstream 2000 false Chr08: 6611010-6613009 Glycine max
Glyma.08G087300 5.0kb upstream 5.0kb upstream 10626 true Chr08: 6600384-6611009 Glycine max
Glyma.08G087300 5.0kb upstream 5.0kb upstream 5000 false Chr08: 6600384-6605383 Glycine max
Glyma.08G087300 5.0kb downstream 5.0kb downstream 10626 true Chr08: 6605384-6616009 Glycine max
Glyma.08G087300 5.0kb downstream 5.0kb downstream 5000 false Chr08: 6611010-6616009 Glycine max
Glyma.08G087300 10.0kb upstream 10.0kb upstream 15626 true Chr08: 6595384-6611009 Glycine max
Glyma.08G087300 10.0kb upstream 10.0kb upstream 10000 false Chr08: 6595384-6605383 Glycine max
Glyma.08G087300 10.0kb downstream 10.0kb downstream 15626 true Chr08: 6605384-6621009 Glycine max
Glyma.08G087300 10.0kb downstream 10.0kb downstream 10000 false Chr08: 6611010-6621009 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311207 5265 Fabidae View MSA
124069200 5270 Rosid View MSA
123737302 5271 Pentapetalae View MSA
122788336 5272 Eudicot View MSA
122045942 5273 Angiosperm View MSA
121346195 5274 Embryophyte View MSA
123426796 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.39942 0.0 6.99696   Low
cufflinks 2.24035 0.0 6.60419   Low
cufflinks 13.2284 0.0 35.5509   High
cufflinks 13.8375 0.0 37.2379   High
cufflinks 9.37672 0.0 25.0176    
cufflinks 4.62769 0.0 12.6259    
cufflinks 6.62391 0.0 17.7675    
cufflinks 8.39903 0.0 22.4181    
cufflinks 6.63719 0.0 17.7971    
cufflinks 9.105     High  
cufflinks 13.35     High High
cufflinks 7.309     High  
cufflinks 7.151        
cufflinks 7.301     High  
cufflinks 5.771     High  
cufflinks 1.492       Low
cufflinks 14.372     High High
cufflinks 4.1        
cufflinks 2.548        
cufflinks 1.076       Low
cufflinks 9.914     High  
cufflinks 1.37       Low
cufflinks 1.317       Low
cufflinks 10.981     High  
cufflinks 1.389       Low
cufflinks 18.866     High High

0 Strain