Gene : Glyma.08G092400 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR31421:SF0 - PROTEIN BASIC PENTACYSTEINE1-RELATED Genomic Order:  924
Name:  ? Glyma.08G092400 Secondary Identifier:  ? PAC:30538726
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G092400 0.5kb upstream 0.5kb upstream 2486 true Chr08: 7001438-7003923 Glycine max
Glyma.08G092400 0.5kb upstream 0.5kb upstream 500 false Chr08: 7001438-7001937 Glycine max
Glyma.08G092400 0.5kb downstream 0.5kb downstream 2486 true Chr08: 7001938-7004423 Glycine max
Glyma.08G092400 0.5kb downstream 0.5kb downstream 500 false Chr08: 7003924-7004423 Glycine max
Glyma.08G092400 1.0kb upstream 1.0kb upstream 2986 true Chr08: 7000938-7003923 Glycine max
Glyma.08G092400 1.0kb upstream 1.0kb upstream 1000 false Chr08: 7000938-7001937 Glycine max
Glyma.08G092400 1.0kb downstream 1.0kb downstream 2986 true Chr08: 7001938-7004923 Glycine max
Glyma.08G092400 1.0kb downstream 1.0kb downstream 1000 false Chr08: 7003924-7004923 Glycine max
Glyma.08G092400 2.0kb upstream 2.0kb upstream 3986 true Chr08: 6999938-7003923 Glycine max
Glyma.08G092400 2.0kb upstream 2.0kb upstream 2000 false Chr08: 6999938-7001937 Glycine max
Glyma.08G092400 2.0kb downstream 2.0kb downstream 3986 true Chr08: 7001938-7005923 Glycine max
Glyma.08G092400 2.0kb downstream 2.0kb downstream 2000 false Chr08: 7003924-7005923 Glycine max
Glyma.08G092400 5.0kb upstream 5.0kb upstream 6986 true Chr08: 6996938-7003923 Glycine max
Glyma.08G092400 5.0kb upstream 5.0kb upstream 5000 false Chr08: 6996938-7001937 Glycine max
Glyma.08G092400 5.0kb downstream 5.0kb downstream 6986 true Chr08: 7001938-7008923 Glycine max
Glyma.08G092400 5.0kb downstream 5.0kb downstream 5000 false Chr08: 7003924-7008923 Glycine max
Glyma.08G092400 10.0kb upstream 10.0kb upstream 11986 true Chr08: 6991938-7003923 Glycine max
Glyma.08G092400 10.0kb upstream 10.0kb upstream 10000 false Chr08: 6991938-7001937 Glycine max
Glyma.08G092400 10.0kb downstream 10.0kb downstream 11986 true Chr08: 7001938-7013923 Glycine max
Glyma.08G092400 10.0kb downstream 10.0kb downstream 10000 false Chr08: 7003924-7013923 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299711 5265 Fabidae View MSA
124073198 5270 Rosid View MSA
123750720 5271 Pentapetalae View MSA
122788133 5272 Eudicot View MSA
122049801 5273 Angiosperm View MSA
121311594 5274 Embryophyte View MSA
123348870 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.78105 0.0 37.9817    
cufflinks 13.317 0.0 53.0924    
cufflinks 10.2908 0.0 43.9434    
cufflinks 8.79231 0.0 37.7961    
cufflinks 14.7535 0.0 57.5697    
cufflinks 33.3015 0.0 128.793 High High
cufflinks 15.2549 0.0 60.7899    
cufflinks 10.7468 0.0 44.1851    
cufflinks 11.9073 0.0 49.3454    
cufflinks 2.22       Low
cufflinks 4.265       High
cufflinks 2.463        
cufflinks 3.211        
cufflinks 3.853       High
cufflinks 2.59        
cufflinks 2.701        
cufflinks 3.239        
cufflinks 1.717       Low
cufflinks 3.182        
cufflinks 2.751        
cufflinks 3.471        
cufflinks 2.37        
cufflinks 3.138        
cufflinks 4.012       High
cufflinks 2.305        
cufflinks 3.979       High

0 Strain