Gene : Glyma.08G081500 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR21256 - HISTIDINOL DEHYDROGENASE HDH Genomic Order:  815
Name:  ? Glyma.08G081500 Secondary Identifier:  ? PAC:30537215
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax HISTSYN-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G081500 0.5kb upstream 0.5kb upstream 9520 true Chr08: 6152552-6162071 Glycine max
Glyma.08G081500 0.5kb upstream 0.5kb upstream 500 false Chr08: 6161572-6162071 Glycine max
Glyma.08G081500 0.5kb downstream 0.5kb downstream 9520 true Chr08: 6152052-6161571 Glycine max
Glyma.08G081500 0.5kb downstream 0.5kb downstream 500 false Chr08: 6152052-6152551 Glycine max
Glyma.08G081500 1.0kb upstream 1.0kb upstream 10020 true Chr08: 6152552-6162571 Glycine max
Glyma.08G081500 1.0kb upstream 1.0kb upstream 1000 false Chr08: 6161572-6162571 Glycine max
Glyma.08G081500 1.0kb downstream 1.0kb downstream 10020 true Chr08: 6151552-6161571 Glycine max
Glyma.08G081500 1.0kb downstream 1.0kb downstream 1000 false Chr08: 6151552-6152551 Glycine max
Glyma.08G081500 2.0kb upstream 2.0kb upstream 11020 true Chr08: 6152552-6163571 Glycine max
Glyma.08G081500 2.0kb upstream 2.0kb upstream 2000 false Chr08: 6161572-6163571 Glycine max
Glyma.08G081500 2.0kb downstream 2.0kb downstream 11020 true Chr08: 6150552-6161571 Glycine max
Glyma.08G081500 2.0kb downstream 2.0kb downstream 2000 false Chr08: 6150552-6152551 Glycine max
Glyma.08G081500 5.0kb upstream 5.0kb upstream 14020 true Chr08: 6152552-6166571 Glycine max
Glyma.08G081500 5.0kb upstream 5.0kb upstream 5000 false Chr08: 6161572-6166571 Glycine max
Glyma.08G081500 5.0kb downstream 5.0kb downstream 14020 true Chr08: 6147552-6161571 Glycine max
Glyma.08G081500 5.0kb downstream 5.0kb downstream 5000 false Chr08: 6147552-6152551 Glycine max
Glyma.08G081500 10.0kb upstream 10.0kb upstream 19020 true Chr08: 6152552-6171571 Glycine max
Glyma.08G081500 10.0kb upstream 10.0kb upstream 10000 false Chr08: 6161572-6171571 Glycine max
Glyma.08G081500 10.0kb downstream 10.0kb downstream 19020 true Chr08: 6142552-6161571 Glycine max
Glyma.08G081500 10.0kb downstream 10.0kb downstream 10000 false Chr08: 6142552-6152551 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122253909 5265 Fabidae View MSA
124061664 5270 Rosid View MSA
123738837 5271 Pentapetalae View MSA
122785994 5272 Eudicot View MSA
122046994 5273 Angiosperm View MSA
121351553 5274 Embryophyte View MSA
123424167 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.2563 0.0 55.222   High
cufflinks 8.1024 0.0 35.6653    
cufflinks 6.73366 0.0 32.3027    
cufflinks 8.02673 0.0 31.9898    
cufflinks 9.64718 0.0 37.8342    
cufflinks 14.5329 0.0 61.5313   High
cufflinks 5.32493 0.0 23.4322   Low
cufflinks 7.54239 0.0 31.2073    
cufflinks 9.03192 0.0 36.5848    
cufflinks 0.246        
cufflinks 0.231       Low
cufflinks 0.375        
cufflinks 0.485       High
cufflinks 0.552       High
cufflinks 0.181       Low
cufflinks 0.294        
cufflinks 0.222       Low
cufflinks 0.384        
cufflinks 0.293        
cufflinks 0.305        
cufflinks 0.294        
cufflinks 0.368        
cufflinks 0.291        
cufflinks 0.279        
cufflinks 0.301        
cufflinks 0.306        

0 Strain