Gene : Glyma.08G074600 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR23147//PTHR23147:SF1 - SERINE/ARGININE RICH SPLICING FACTOR Genomic Order:  746
Name:  ? Glyma.08G074600 Secondary Identifier:  ? PAC:30541171
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G074600 0.5kb upstream 0.5kb upstream 3728 true Chr08: 5695014-5698741 Glycine max
Glyma.08G074600 0.5kb upstream 0.5kb upstream 500 false Chr08: 5695014-5695513 Glycine max
Glyma.08G074600 0.5kb downstream 0.5kb downstream 3728 true Chr08: 5695514-5699241 Glycine max
Glyma.08G074600 0.5kb downstream 0.5kb downstream 500 false Chr08: 5698742-5699241 Glycine max
Glyma.08G074600 1.0kb upstream 1.0kb upstream 4228 true Chr08: 5694514-5698741 Glycine max
Glyma.08G074600 1.0kb upstream 1.0kb upstream 1000 false Chr08: 5694514-5695513 Glycine max
Glyma.08G074600 1.0kb downstream 1.0kb downstream 4228 true Chr08: 5695514-5699741 Glycine max
Glyma.08G074600 1.0kb downstream 1.0kb downstream 1000 false Chr08: 5698742-5699741 Glycine max
Glyma.08G074600 2.0kb upstream 2.0kb upstream 5228 true Chr08: 5693514-5698741 Glycine max
Glyma.08G074600 2.0kb upstream 2.0kb upstream 2000 false Chr08: 5693514-5695513 Glycine max
Glyma.08G074600 2.0kb downstream 2.0kb downstream 5228 true Chr08: 5695514-5700741 Glycine max
Glyma.08G074600 2.0kb downstream 2.0kb downstream 2000 false Chr08: 5698742-5700741 Glycine max
Glyma.08G074600 5.0kb upstream 5.0kb upstream 8228 true Chr08: 5690514-5698741 Glycine max
Glyma.08G074600 5.0kb upstream 5.0kb upstream 5000 false Chr08: 5690514-5695513 Glycine max
Glyma.08G074600 5.0kb downstream 5.0kb downstream 8228 true Chr08: 5695514-5703741 Glycine max
Glyma.08G074600 5.0kb downstream 5.0kb downstream 5000 false Chr08: 5698742-5703741 Glycine max
Glyma.08G074600 10.0kb upstream 10.0kb upstream 13228 true Chr08: 5685514-5698741 Glycine max
Glyma.08G074600 10.0kb upstream 10.0kb upstream 10000 false Chr08: 5685514-5695513 Glycine max
Glyma.08G074600 10.0kb downstream 10.0kb downstream 13228 true Chr08: 5695514-5708741 Glycine max
Glyma.08G074600 10.0kb downstream 10.0kb downstream 10000 false Chr08: 5698742-5708741 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314387 5265 Fabidae View MSA
124062846 5270 Rosid View MSA
123750776 5271 Pentapetalae View MSA
122794674 5272 Eudicot View MSA
122050337 5273 Angiosperm View MSA
121345725 5274 Embryophyte View MSA
123428073 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.12297 0.0 4.12783   High
cufflinks 0.397484 0.0 1.53498    
cufflinks 0.932335 0.0 3.45757   High
cufflinks 0.585606 0.0 2.2211    
cufflinks 0.703551 0.0 2.64372    
cufflinks 0.370339 0.0 1.43281    
cufflinks 0.239487 0.0 0.942474   Low
cufflinks 0.710295 0.0 2.66937    
cufflinks 0.520238 0.0 1.9826    
cufflinks 0.773        
cufflinks 0.434       Low
cufflinks 1.107        
cufflinks 0.496        
cufflinks 0.637        
cufflinks 0.323       Low
cufflinks 1.022        
cufflinks 0.656        
cufflinks 1.235       High
cufflinks 0.744        
cufflinks 1.372       High
cufflinks 0.49        
cufflinks 1.218       High
cufflinks 0.986        
cufflinks 0.654        
cufflinks 1.011        
cufflinks 0.281       Low

0 Strain