Gene : Glyma.08G069700 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR36066:SF2 - TRANSCRIPTION FACTOR SAC51-RELATED Genomic Order:  697
Name:  ? Glyma.08G069700 Secondary Identifier:  ? PAC:30540174
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G069700 0.5kb upstream 0.5kb upstream 2555 true Chr08: 5316936-5319490 Glycine max
Glyma.08G069700 0.5kb upstream 0.5kb upstream 500 false Chr08: 5316936-5317435 Glycine max
Glyma.08G069700 0.5kb downstream 0.5kb downstream 2555 true Chr08: 5317436-5319990 Glycine max
Glyma.08G069700 0.5kb downstream 0.5kb downstream 500 false Chr08: 5319491-5319990 Glycine max
Glyma.08G069700 1.0kb upstream 1.0kb upstream 3055 true Chr08: 5316436-5319490 Glycine max
Glyma.08G069700 1.0kb upstream 1.0kb upstream 1000 false Chr08: 5316436-5317435 Glycine max
Glyma.08G069700 1.0kb downstream 1.0kb downstream 3055 true Chr08: 5317436-5320490 Glycine max
Glyma.08G069700 1.0kb downstream 1.0kb downstream 1000 false Chr08: 5319491-5320490 Glycine max
Glyma.08G069700 2.0kb upstream 2.0kb upstream 4055 true Chr08: 5315436-5319490 Glycine max
Glyma.08G069700 2.0kb upstream 2.0kb upstream 2000 false Chr08: 5315436-5317435 Glycine max
Glyma.08G069700 2.0kb downstream 2.0kb downstream 4055 true Chr08: 5317436-5321490 Glycine max
Glyma.08G069700 2.0kb downstream 2.0kb downstream 2000 false Chr08: 5319491-5321490 Glycine max
Glyma.08G069700 5.0kb upstream 5.0kb upstream 7055 true Chr08: 5312436-5319490 Glycine max
Glyma.08G069700 5.0kb upstream 5.0kb upstream 5000 false Chr08: 5312436-5317435 Glycine max
Glyma.08G069700 5.0kb downstream 5.0kb downstream 7055 true Chr08: 5317436-5324490 Glycine max
Glyma.08G069700 5.0kb downstream 5.0kb downstream 5000 false Chr08: 5319491-5324490 Glycine max
Glyma.08G069700 10.0kb upstream 10.0kb upstream 12055 true Chr08: 5307436-5319490 Glycine max
Glyma.08G069700 10.0kb upstream 10.0kb upstream 10000 false Chr08: 5307436-5317435 Glycine max
Glyma.08G069700 10.0kb downstream 10.0kb downstream 12055 true Chr08: 5317436-5329490 Glycine max
Glyma.08G069700 10.0kb downstream 10.0kb downstream 10000 false Chr08: 5319491-5329490 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122255335 5265 Fabidae View MSA
123997102 5270 Rosid View MSA
123750952 5271 Pentapetalae View MSA
122794096 5272 Eudicot View MSA
122042740 5273 Angiosperm View MSA
121310013 5274 Embryophyte View MSA
123347619 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.1679 0.0 32.6749    
cufflinks 16.3763 0.0 43.6942    
cufflinks 30.4071 0.0 82.7998 High High
cufflinks 11.3382 0.0 30.5038    
cufflinks 7.11863 0.0 19.8019   Low
cufflinks 12.3695 0.0 33.187    
cufflinks 11.957 0.0 32.1555    
cufflinks 27.5151 0.0 74.2603 High High
cufflinks 23.2871 0.0 62.4282 High  
cufflinks 22.492     High High
cufflinks 2.421       Low
cufflinks 38.18     High High
cufflinks 8.085     High  
cufflinks 1.958       Low
cufflinks 5.815     High  
cufflinks 8.421     High  
cufflinks 11.255     High  
cufflinks 16.98     High  
cufflinks 19.261     High High
cufflinks 10.257     High  
cufflinks 5.338        
cufflinks 11.306     High  
cufflinks 8.3     High  
cufflinks 6.988     High  
cufflinks 10.1     High  
cufflinks 6.987     High  

0 Strain