Gene : Glyma.08G117100 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR11119//PTHR11119:SF47 - XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER Genomic Order:  1171
Name:  ? Glyma.08G117100 Secondary Identifier:  ? PAC:30538551
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G117100 0.5kb upstream 0.5kb upstream 4424 true Chr08: 9031736-9036159 Glycine max
Glyma.08G117100 0.5kb upstream 0.5kb upstream 500 false Chr08: 9031736-9032235 Glycine max
Glyma.08G117100 0.5kb downstream 0.5kb downstream 4424 true Chr08: 9032236-9036659 Glycine max
Glyma.08G117100 0.5kb downstream 0.5kb downstream 500 false Chr08: 9036160-9036659 Glycine max
Glyma.08G117100 1.0kb upstream 1.0kb upstream 4924 true Chr08: 9031236-9036159 Glycine max
Glyma.08G117100 1.0kb upstream 1.0kb upstream 1000 false Chr08: 9031236-9032235 Glycine max
Glyma.08G117100 1.0kb downstream 1.0kb downstream 4924 true Chr08: 9032236-9037159 Glycine max
Glyma.08G117100 1.0kb downstream 1.0kb downstream 1000 false Chr08: 9036160-9037159 Glycine max
Glyma.08G117100 2.0kb upstream 2.0kb upstream 5924 true Chr08: 9030236-9036159 Glycine max
Glyma.08G117100 2.0kb upstream 2.0kb upstream 2000 false Chr08: 9030236-9032235 Glycine max
Glyma.08G117100 2.0kb downstream 2.0kb downstream 5924 true Chr08: 9032236-9038159 Glycine max
Glyma.08G117100 2.0kb downstream 2.0kb downstream 2000 false Chr08: 9036160-9038159 Glycine max
Glyma.08G117100 5.0kb upstream 5.0kb upstream 8924 true Chr08: 9027236-9036159 Glycine max
Glyma.08G117100 5.0kb upstream 5.0kb upstream 5000 false Chr08: 9027236-9032235 Glycine max
Glyma.08G117100 5.0kb downstream 5.0kb downstream 8924 true Chr08: 9032236-9041159 Glycine max
Glyma.08G117100 5.0kb downstream 5.0kb downstream 5000 false Chr08: 9036160-9041159 Glycine max
Glyma.08G117100 10.0kb upstream 10.0kb upstream 13924 true Chr08: 9022236-9036159 Glycine max
Glyma.08G117100 10.0kb upstream 10.0kb upstream 10000 false Chr08: 9022236-9032235 Glycine max
Glyma.08G117100 10.0kb downstream 10.0kb downstream 13924 true Chr08: 9032236-9046159 Glycine max
Glyma.08G117100 10.0kb downstream 10.0kb downstream 10000 false Chr08: 9036160-9046159 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305501 5265 Fabidae View MSA
124067921 5270 Rosid View MSA
123749594 5271 Pentapetalae View MSA
122792857 5272 Eudicot View MSA
122044330 5273 Angiosperm View MSA
121348988 5274 Embryophyte View MSA
123428829 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.505469 0.0 1.90194   Low
cufflinks 17.9478 0.0 48.2585   High
cufflinks 1.42021 0.0 5.02059   Low
cufflinks 5.56164 0.0 16.7117    
cufflinks 6.9541 0.0 20.2774    
cufflinks 4.5083 0.0 13.9158    
cufflinks 14.486 0.0 39.3391    
cufflinks 7.9924 0.0 22.9085    
cufflinks 8.32483 0.0 23.7264    
cufflinks 1.996        
cufflinks 0.808        
cufflinks 2.505        
cufflinks 6.43       High
cufflinks 8.357     High High
cufflinks 0.189       Low
cufflinks 4.266        
cufflinks 1.208        
cufflinks 1.946        
cufflinks 10.716     High High
cufflinks 2.879        
cufflinks 0.573       Low
cufflinks 3.973        
cufflinks 5.832        
cufflinks 0.776        
cufflinks 3.257        
cufflinks 0.963        

0 Strain