Gene : Glyma.08G118600 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31161:SF7 - F28N24.3 PROTEIN Genomic Order:  1186
Name:  ? Glyma.08G118600 Secondary Identifier:  ? PAC:30539820
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G118600 0.5kb upstream 0.5kb upstream 2887 true Chr08: 9169843-9172729 Glycine max
Glyma.08G118600 0.5kb upstream 0.5kb upstream 500 false Chr08: 9172230-9172729 Glycine max
Glyma.08G118600 0.5kb downstream 0.5kb downstream 2887 true Chr08: 9169343-9172229 Glycine max
Glyma.08G118600 0.5kb downstream 0.5kb downstream 500 false Chr08: 9169343-9169842 Glycine max
Glyma.08G118600 1.0kb upstream 1.0kb upstream 3387 true Chr08: 9169843-9173229 Glycine max
Glyma.08G118600 1.0kb upstream 1.0kb upstream 1000 false Chr08: 9172230-9173229 Glycine max
Glyma.08G118600 1.0kb downstream 1.0kb downstream 3387 true Chr08: 9168843-9172229 Glycine max
Glyma.08G118600 1.0kb downstream 1.0kb downstream 1000 false Chr08: 9168843-9169842 Glycine max
Glyma.08G118600 2.0kb upstream 2.0kb upstream 4387 true Chr08: 9169843-9174229 Glycine max
Glyma.08G118600 2.0kb upstream 2.0kb upstream 2000 false Chr08: 9172230-9174229 Glycine max
Glyma.08G118600 2.0kb downstream 2.0kb downstream 4387 true Chr08: 9167843-9172229 Glycine max
Glyma.08G118600 2.0kb downstream 2.0kb downstream 2000 false Chr08: 9167843-9169842 Glycine max
Glyma.08G118600 5.0kb upstream 5.0kb upstream 7387 true Chr08: 9169843-9177229 Glycine max
Glyma.08G118600 5.0kb upstream 5.0kb upstream 5000 false Chr08: 9172230-9177229 Glycine max
Glyma.08G118600 5.0kb downstream 5.0kb downstream 7387 true Chr08: 9164843-9172229 Glycine max
Glyma.08G118600 5.0kb downstream 5.0kb downstream 5000 false Chr08: 9164843-9169842 Glycine max
Glyma.08G118600 10.0kb upstream 10.0kb upstream 12387 true Chr08: 9169843-9182229 Glycine max
Glyma.08G118600 10.0kb upstream 10.0kb upstream 10000 false Chr08: 9172230-9182229 Glycine max
Glyma.08G118600 10.0kb downstream 10.0kb downstream 12387 true Chr08: 9159843-9172229 Glycine max
Glyma.08G118600 10.0kb downstream 10.0kb downstream 10000 false Chr08: 9159843-9169842 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041109 5273 Angiosperm View MSA
122308887 5265 Fabidae View MSA
124063143 5270 Rosid View MSA
123743668 5271 Pentapetalae View MSA
122791275 5272 Eudicot View MSA
121351569 5274 Embryophyte View MSA
123382231 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0840445 0.0 0.332936 Low Low
cufflinks 1.26784 0.0 4.32233    
cufflinks 1.15504 0.0 3.98046    
cufflinks 0.35866 0.0 1.33586    
cufflinks 1.30437 0.0 4.43008    
cufflinks 0.603226 0.0 2.18517    
cufflinks 0.284583 0.0 1.07232    
cufflinks 2.00727 0.0 6.43191   High
cufflinks 1.48275 0.0 4.9586    
cufflinks 0.58        
cufflinks 0.313        
cufflinks 2.733       High
cufflinks 0.477        
cufflinks 0.671        
cufflinks 0.321        
cufflinks 0.294        
cufflinks 0.3        
cufflinks 1.178       High
cufflinks 2.062       High
cufflinks 0.202       Low
cufflinks 0.706        
cufflinks 0.207       Low
cufflinks 0.177       Low
cufflinks 0.502        
cufflinks 0.219        
cufflinks 0.347        

0 Strain