Gene : Glyma.08G114700 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR31250:SF4 - CALMODULIN-BINDING FAMILY PROTEIN-RELATED Genomic Order:  1147
Name:  ? Glyma.08G114700 Secondary Identifier:  ? PAC:30540531
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G114700 0.5kb upstream 0.5kb upstream 4620 true Chr08: 8768854-8773473 Glycine max
Glyma.08G114700 0.5kb upstream 0.5kb upstream 500 false Chr08: 8772974-8773473 Glycine max
Glyma.08G114700 0.5kb downstream 0.5kb downstream 4620 true Chr08: 8768354-8772973 Glycine max
Glyma.08G114700 0.5kb downstream 0.5kb downstream 500 false Chr08: 8768354-8768853 Glycine max
Glyma.08G114700 1.0kb upstream 1.0kb upstream 5120 true Chr08: 8768854-8773973 Glycine max
Glyma.08G114700 1.0kb upstream 1.0kb upstream 1000 false Chr08: 8772974-8773973 Glycine max
Glyma.08G114700 1.0kb downstream 1.0kb downstream 5120 true Chr08: 8767854-8772973 Glycine max
Glyma.08G114700 1.0kb downstream 1.0kb downstream 1000 false Chr08: 8767854-8768853 Glycine max
Glyma.08G114700 2.0kb upstream 2.0kb upstream 6120 true Chr08: 8768854-8774973 Glycine max
Glyma.08G114700 2.0kb upstream 2.0kb upstream 2000 false Chr08: 8772974-8774973 Glycine max
Glyma.08G114700 2.0kb downstream 2.0kb downstream 6120 true Chr08: 8766854-8772973 Glycine max
Glyma.08G114700 2.0kb downstream 2.0kb downstream 2000 false Chr08: 8766854-8768853 Glycine max
Glyma.08G114700 5.0kb upstream 5.0kb upstream 9120 true Chr08: 8768854-8777973 Glycine max
Glyma.08G114700 5.0kb upstream 5.0kb upstream 5000 false Chr08: 8772974-8777973 Glycine max
Glyma.08G114700 5.0kb downstream 5.0kb downstream 9120 true Chr08: 8763854-8772973 Glycine max
Glyma.08G114700 5.0kb downstream 5.0kb downstream 5000 false Chr08: 8763854-8768853 Glycine max
Glyma.08G114700 10.0kb upstream 10.0kb upstream 14120 true Chr08: 8768854-8782973 Glycine max
Glyma.08G114700 10.0kb upstream 10.0kb upstream 10000 false Chr08: 8772974-8782973 Glycine max
Glyma.08G114700 10.0kb downstream 10.0kb downstream 14120 true Chr08: 8758854-8772973 Glycine max
Glyma.08G114700 10.0kb downstream 10.0kb downstream 10000 false Chr08: 8758854-8768853 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300580 5265 Fabidae View MSA
124062345 5270 Rosid View MSA
123742026 5271 Pentapetalae View MSA
122795644 5272 Eudicot View MSA
122045965 5273 Angiosperm View MSA
121351725 5274 Embryophyte View MSA
123382293 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.768325 0.0 3.28839    
cufflinks 0.738312 0.0 3.16337    
cufflinks 0.206735 0.0 1.3643 Low Low
cufflinks 0.165304 0.0 1.14662 Low Low
cufflinks 4.25247 0.0 14.3821   High
cufflinks 2.90479 0.0 10.7847   High
cufflinks 0.417026 0.0 1.92211    
cufflinks 0.517577 0.0 3.0607    
cufflinks 3.46952 0.0 12.1993   High
cufflinks 0.889        
cufflinks 2.61        
cufflinks 0.175       Low
cufflinks 7.895     High High
cufflinks 2.928        
cufflinks 4.069       High
cufflinks 0.222        
cufflinks 4.153       High
cufflinks 0.31        
cufflinks 0.349        
cufflinks 0.101       Low
cufflinks 1.087        
cufflinks 0.171       Low
cufflinks 0.238        
cufflinks 1.011        
cufflinks 0.133       Low
cufflinks 8.176     High High

0 Strain