Gene : Glyma.08G103000 G. max Wm82.a2.v1
Defline:  (1 of 3) PF00449 - Urease alpha-subunit, N-terminal domain (Urease_alpha) Genomic Order:  1030
Name:  ? Glyma.08G103000 Secondary Identifier:  ? PAC:30538845
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5704 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G103000 0.5kb upstream 0.5kb upstream 6349 true Chr08: 7893965-7900313 Glycine max
Glyma.08G103000 0.5kb upstream 0.5kb upstream 500 false Chr08: 7899814-7900313 Glycine max
Glyma.08G103000 0.5kb downstream 0.5kb downstream 6349 true Chr08: 7893465-7899813 Glycine max
Glyma.08G103000 0.5kb downstream 0.5kb downstream 500 false Chr08: 7893465-7893964 Glycine max
Glyma.08G103000 1.0kb upstream 1.0kb upstream 6849 true Chr08: 7893965-7900813 Glycine max
Glyma.08G103000 1.0kb upstream 1.0kb upstream 1000 false Chr08: 7899814-7900813 Glycine max
Glyma.08G103000 1.0kb downstream 1.0kb downstream 6849 true Chr08: 7892965-7899813 Glycine max
Glyma.08G103000 1.0kb downstream 1.0kb downstream 1000 false Chr08: 7892965-7893964 Glycine max
Glyma.08G103000 2.0kb upstream 2.0kb upstream 7849 true Chr08: 7893965-7901813 Glycine max
Glyma.08G103000 2.0kb upstream 2.0kb upstream 2000 false Chr08: 7899814-7901813 Glycine max
Glyma.08G103000 2.0kb downstream 2.0kb downstream 7849 true Chr08: 7891965-7899813 Glycine max
Glyma.08G103000 2.0kb downstream 2.0kb downstream 2000 false Chr08: 7891965-7893964 Glycine max
Glyma.08G103000 5.0kb upstream 5.0kb upstream 10849 true Chr08: 7893965-7904813 Glycine max
Glyma.08G103000 5.0kb upstream 5.0kb upstream 5000 false Chr08: 7899814-7904813 Glycine max
Glyma.08G103000 5.0kb downstream 5.0kb downstream 10849 true Chr08: 7888965-7899813 Glycine max
Glyma.08G103000 5.0kb downstream 5.0kb downstream 5000 false Chr08: 7888965-7893964 Glycine max
Glyma.08G103000 10.0kb upstream 10.0kb upstream 15849 true Chr08: 7893965-7909813 Glycine max
Glyma.08G103000 10.0kb upstream 10.0kb upstream 10000 false Chr08: 7899814-7909813 Glycine max
Glyma.08G103000 10.0kb downstream 10.0kb downstream 15849 true Chr08: 7883965-7899813 Glycine max
Glyma.08G103000 10.0kb downstream 10.0kb downstream 10000 false Chr08: 7883965-7893964 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122240103 5265 Fabidae Singleton cluster - no MSA
124068403 5270 Rosid View MSA
123740232 5271 Pentapetalae View MSA
122790945 5272 Eudicot View MSA
122047668 5273 Angiosperm View MSA
121343969 5274 Embryophyte View MSA
123425205 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.52331 0.0 7.8874   High
cufflinks 0.0211984 0.0 0.0903942 Low  
cufflinks 0.0107592 0.0 0.0486638 Low  
cufflinks 0.005     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.011     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.016     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low  
cufflinks 0.002     Low  
cufflinks 0.004     Low  
cufflinks 0.045     Low High
cufflinks 0.003     Low  
cufflinks 0.003     Low  
cufflinks 0.002     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.002     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain