Gene : Glyma.08G093300 G. max Wm82.a2.v1
Defline:  (1 of 11) PTHR10161 - TARTRATE-RESISTANT ACID PHOSPHATASE TYPE 5 Genomic Order:  933
Name:  ? Glyma.08G093300 Secondary Identifier:  ? PAC:30540334
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5083 Glycine max pathologic  
Gmax PWY-6348 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G093300 0.5kb upstream 0.5kb upstream 4500 true Chr08: 7072042-7076541 Glycine max
Glyma.08G093300 0.5kb upstream 0.5kb upstream 500 false Chr08: 7076042-7076541 Glycine max
Glyma.08G093300 0.5kb downstream 0.5kb downstream 4500 true Chr08: 7071542-7076041 Glycine max
Glyma.08G093300 0.5kb downstream 0.5kb downstream 500 false Chr08: 7071542-7072041 Glycine max
Glyma.08G093300 1.0kb upstream 1.0kb upstream 5000 true Chr08: 7072042-7077041 Glycine max
Glyma.08G093300 1.0kb upstream 1.0kb upstream 1000 false Chr08: 7076042-7077041 Glycine max
Glyma.08G093300 1.0kb downstream 1.0kb downstream 5000 true Chr08: 7071042-7076041 Glycine max
Glyma.08G093300 1.0kb downstream 1.0kb downstream 1000 false Chr08: 7071042-7072041 Glycine max
Glyma.08G093300 2.0kb upstream 2.0kb upstream 6000 true Chr08: 7072042-7078041 Glycine max
Glyma.08G093300 2.0kb upstream 2.0kb upstream 2000 false Chr08: 7076042-7078041 Glycine max
Glyma.08G093300 2.0kb downstream 2.0kb downstream 6000 true Chr08: 7070042-7076041 Glycine max
Glyma.08G093300 2.0kb downstream 2.0kb downstream 2000 false Chr08: 7070042-7072041 Glycine max
Glyma.08G093300 5.0kb upstream 5.0kb upstream 9000 true Chr08: 7072042-7081041 Glycine max
Glyma.08G093300 5.0kb upstream 5.0kb upstream 5000 false Chr08: 7076042-7081041 Glycine max
Glyma.08G093300 5.0kb downstream 5.0kb downstream 9000 true Chr08: 7067042-7076041 Glycine max
Glyma.08G093300 5.0kb downstream 5.0kb downstream 5000 false Chr08: 7067042-7072041 Glycine max
Glyma.08G093300 10.0kb upstream 10.0kb upstream 14000 true Chr08: 7072042-7086041 Glycine max
Glyma.08G093300 10.0kb upstream 10.0kb upstream 10000 false Chr08: 7076042-7086041 Glycine max
Glyma.08G093300 10.0kb downstream 10.0kb downstream 14000 true Chr08: 7062042-7076041 Glycine max
Glyma.08G093300 10.0kb downstream 10.0kb downstream 10000 false Chr08: 7062042-7072041 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315085 5265 Fabidae View MSA
124061132 5270 Rosid View MSA
123743122 5271 Pentapetalae View MSA
122795933 5272 Eudicot View MSA
122045102 5273 Angiosperm View MSA
121351076 5274 Embryophyte View MSA
123427142 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0567547 0.0 0.233275 Low Low
cufflinks 0.137593 0.0 0.541546 Low  
cufflinks 2.45108 0.0 8.89635    
cufflinks 0.114015 0.0 0.451601 Low  
cufflinks 6.62366 0.0 22.9321    
cufflinks 70.406 0.0 293.379 High High
cufflinks 0.28985 0.0 1.43172    
cufflinks 3.33099 0.0 10.8014    
cufflinks 9.30465 0.0 29.8489    
cufflinks 2.17        
cufflinks 2.299        
cufflinks 0.434        
cufflinks 6.446       High
cufflinks 0.681        
cufflinks 1.186        
cufflinks 0.075     Low  
cufflinks 2.788        
cufflinks 0.029     Low Low
cufflinks 0.011     Low Low
cufflinks 0.072     Low  
cufflinks 2.058        
cufflinks 0.036     Low Low
cufflinks 0.051     Low Low
cufflinks 2.052        
cufflinks 0.11        
cufflinks 2.877        

0 Strain