Gene : Glyma.08G093500 G. max Wm82.a2.v1
Defline:  (1 of 11) PTHR10161 - TARTRATE-RESISTANT ACID PHOSPHATASE TYPE 5 Genomic Order:  935
Name:  ? Glyma.08G093500 Secondary Identifier:  ? PAC:30538701
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5083 Glycine max pathologic  
Gmax PWY-6348 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G093500 0.5kb upstream 0.5kb upstream 4074 true Chr08: 7087954-7092027 Glycine max
Glyma.08G093500 0.5kb upstream 0.5kb upstream 500 false Chr08: 7087954-7088453 Glycine max
Glyma.08G093500 0.5kb downstream 0.5kb downstream 4074 true Chr08: 7088454-7092527 Glycine max
Glyma.08G093500 0.5kb downstream 0.5kb downstream 500 false Chr08: 7092028-7092527 Glycine max
Glyma.08G093500 1.0kb upstream 1.0kb upstream 4574 true Chr08: 7087454-7092027 Glycine max
Glyma.08G093500 1.0kb upstream 1.0kb upstream 1000 false Chr08: 7087454-7088453 Glycine max
Glyma.08G093500 1.0kb downstream 1.0kb downstream 4574 true Chr08: 7088454-7093027 Glycine max
Glyma.08G093500 1.0kb downstream 1.0kb downstream 1000 false Chr08: 7092028-7093027 Glycine max
Glyma.08G093500 2.0kb upstream 2.0kb upstream 5574 true Chr08: 7086454-7092027 Glycine max
Glyma.08G093500 2.0kb upstream 2.0kb upstream 2000 false Chr08: 7086454-7088453 Glycine max
Glyma.08G093500 2.0kb downstream 2.0kb downstream 5574 true Chr08: 7088454-7094027 Glycine max
Glyma.08G093500 2.0kb downstream 2.0kb downstream 2000 false Chr08: 7092028-7094027 Glycine max
Glyma.08G093500 5.0kb upstream 5.0kb upstream 8574 true Chr08: 7083454-7092027 Glycine max
Glyma.08G093500 5.0kb upstream 5.0kb upstream 5000 false Chr08: 7083454-7088453 Glycine max
Glyma.08G093500 5.0kb downstream 5.0kb downstream 8574 true Chr08: 7088454-7097027 Glycine max
Glyma.08G093500 5.0kb downstream 5.0kb downstream 5000 false Chr08: 7092028-7097027 Glycine max
Glyma.08G093500 10.0kb upstream 10.0kb upstream 13574 true Chr08: 7078454-7092027 Glycine max
Glyma.08G093500 10.0kb upstream 10.0kb upstream 10000 false Chr08: 7078454-7088453 Glycine max
Glyma.08G093500 10.0kb downstream 10.0kb downstream 13574 true Chr08: 7088454-7102027 Glycine max
Glyma.08G093500 10.0kb downstream 10.0kb downstream 10000 false Chr08: 7092028-7102027 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122240133 5265 Fabidae Singleton cluster - no MSA
124061132 5270 Rosid View MSA
123743122 5271 Pentapetalae View MSA
122795933 5272 Eudicot View MSA
122045102 5273 Angiosperm View MSA
121351076 5274 Embryophyte View MSA
123427142 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 32.5563 0.0 87.0189 High High
cufflinks 15.0747 0.0 40.8888    
cufflinks 16.0713 0.0 43.3886    
cufflinks 37.7535 0.0 101.379 High High
cufflinks 3.12542 0.0 10.2201    
cufflinks 4.34769 0.0 13.5668    
cufflinks 1.31715 0.0 4.706   Low
cufflinks 27.9834 0.0 74.673 High  
cufflinks 5.00388 0.0 15.2678    
cufflinks 20.652     High High
cufflinks 0.255       Low
cufflinks 5.433        
cufflinks 0.817        
cufflinks 0.066     Low Low
cufflinks 0.448        
cufflinks 15.173     High  
cufflinks 2.033        
cufflinks 5.999        
cufflinks 11.935     High  
cufflinks 12.52     High  
cufflinks 0.502        
cufflinks 15.061     High  
cufflinks 22.824     High High
cufflinks 0.544        
cufflinks 12.945     High  
cufflinks 0.479        

0 Strain