Gene : Glyma.08G093600 G. max Wm82.a2.v1
Defline:  (1 of 11) PTHR10161 - TARTRATE-RESISTANT ACID PHOSPHATASE TYPE 5 Genomic Order:  936
Name:  ? Glyma.08G093600 Secondary Identifier:  ? PAC:30537923
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5083 Glycine max pathologic  
Gmax PWY-6348 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G093600 0.5kb upstream 0.5kb upstream 6321 true Chr08: 7092093-7098413 Glycine max
Glyma.08G093600 0.5kb upstream 0.5kb upstream 500 false Chr08: 7092093-7092592 Glycine max
Glyma.08G093600 0.5kb downstream 0.5kb downstream 6321 true Chr08: 7092593-7098913 Glycine max
Glyma.08G093600 0.5kb downstream 0.5kb downstream 500 false Chr08: 7098414-7098913 Glycine max
Glyma.08G093600 1.0kb upstream 1.0kb upstream 6821 true Chr08: 7091593-7098413 Glycine max
Glyma.08G093600 1.0kb upstream 1.0kb upstream 1000 false Chr08: 7091593-7092592 Glycine max
Glyma.08G093600 1.0kb downstream 1.0kb downstream 6821 true Chr08: 7092593-7099413 Glycine max
Glyma.08G093600 1.0kb downstream 1.0kb downstream 1000 false Chr08: 7098414-7099413 Glycine max
Glyma.08G093600 2.0kb upstream 2.0kb upstream 7821 true Chr08: 7090593-7098413 Glycine max
Glyma.08G093600 2.0kb upstream 2.0kb upstream 2000 false Chr08: 7090593-7092592 Glycine max
Glyma.08G093600 2.0kb downstream 2.0kb downstream 7821 true Chr08: 7092593-7100413 Glycine max
Glyma.08G093600 2.0kb downstream 2.0kb downstream 2000 false Chr08: 7098414-7100413 Glycine max
Glyma.08G093600 5.0kb upstream 5.0kb upstream 10821 true Chr08: 7087593-7098413 Glycine max
Glyma.08G093600 5.0kb upstream 5.0kb upstream 5000 false Chr08: 7087593-7092592 Glycine max
Glyma.08G093600 5.0kb downstream 5.0kb downstream 10821 true Chr08: 7092593-7103413 Glycine max
Glyma.08G093600 5.0kb downstream 5.0kb downstream 5000 false Chr08: 7098414-7103413 Glycine max
Glyma.08G093600 10.0kb upstream 10.0kb upstream 15821 true Chr08: 7082593-7098413 Glycine max
Glyma.08G093600 10.0kb upstream 10.0kb upstream 10000 false Chr08: 7082593-7092592 Glycine max
Glyma.08G093600 10.0kb downstream 10.0kb downstream 15821 true Chr08: 7092593-7108413 Glycine max
Glyma.08G093600 10.0kb downstream 10.0kb downstream 10000 false Chr08: 7098414-7108413 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315085 5265 Fabidae View MSA
124061132 5270 Rosid View MSA
123743122 5271 Pentapetalae View MSA
122795933 5272 Eudicot View MSA
122045102 5273 Angiosperm View MSA
121351076 5274 Embryophyte View MSA
123427142 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.252517 0.0 9.35594   Low
cufflinks 0.437597 0.0 7.13696    
cufflinks 19.383 0.0 88.7908   High
cufflinks 0.967953 0.0 9.82059    
cufflinks 1.06759 0.0 12.2381    
cufflinks 5.27153 0.0 17.6326   High
cufflinks 0.515881 0.0 14.0817    
cufflinks 0.657212 0.0 3.5391    
cufflinks 2.00705 0.0 15.8919    
cufflinks 0.131        
cufflinks 0.446        
cufflinks 2.769       High
cufflinks 0.404        
cufflinks 0.177        
cufflinks 0.468        
cufflinks 0.132        
cufflinks 0.106       Low
cufflinks 0.235        
cufflinks 0.271        
cufflinks 0.15        
cufflinks 0.21        
cufflinks 0.205        
cufflinks 0.078     Low Low
cufflinks 0.593       High
cufflinks 0.143        
cufflinks 0.232        

0 Strain