Gene : Glyma.08G146300 G. max Wm82.a2.v1
Defline:  (1 of 23) PF04755 - PAP_fibrillin (PAP_fibrillin) Genomic Order:  1463
Name:  ? Glyma.08G146300 Secondary Identifier:  ? PAC:30535542
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G146300 0.5kb upstream 0.5kb upstream 3429 true Chr08: 11136129-11139557 Glycine max
Glyma.08G146300 0.5kb upstream 0.5kb upstream 500 false Chr08: 11139058-11139557 Glycine max
Glyma.08G146300 0.5kb downstream 0.5kb downstream 3429 true Chr08: 11135629-11139057 Glycine max
Glyma.08G146300 0.5kb downstream 0.5kb downstream 500 false Chr08: 11135629-11136128 Glycine max
Glyma.08G146300 1.0kb upstream 1.0kb upstream 3929 true Chr08: 11136129-11140057 Glycine max
Glyma.08G146300 1.0kb upstream 1.0kb upstream 1000 false Chr08: 11139058-11140057 Glycine max
Glyma.08G146300 1.0kb downstream 1.0kb downstream 3929 true Chr08: 11135129-11139057 Glycine max
Glyma.08G146300 1.0kb downstream 1.0kb downstream 1000 false Chr08: 11135129-11136128 Glycine max
Glyma.08G146300 2.0kb upstream 2.0kb upstream 4929 true Chr08: 11136129-11141057 Glycine max
Glyma.08G146300 2.0kb upstream 2.0kb upstream 2000 false Chr08: 11139058-11141057 Glycine max
Glyma.08G146300 2.0kb downstream 2.0kb downstream 4929 true Chr08: 11134129-11139057 Glycine max
Glyma.08G146300 2.0kb downstream 2.0kb downstream 2000 false Chr08: 11134129-11136128 Glycine max
Glyma.08G146300 5.0kb upstream 5.0kb upstream 7929 true Chr08: 11136129-11144057 Glycine max
Glyma.08G146300 5.0kb upstream 5.0kb upstream 5000 false Chr08: 11139058-11144057 Glycine max
Glyma.08G146300 5.0kb downstream 5.0kb downstream 7929 true Chr08: 11131129-11139057 Glycine max
Glyma.08G146300 5.0kb downstream 5.0kb downstream 5000 false Chr08: 11131129-11136128 Glycine max
Glyma.08G146300 10.0kb upstream 10.0kb upstream 12929 true Chr08: 11136129-11149057 Glycine max
Glyma.08G146300 10.0kb upstream 10.0kb upstream 10000 false Chr08: 11139058-11149057 Glycine max
Glyma.08G146300 10.0kb downstream 10.0kb downstream 12929 true Chr08: 11126129-11139057 Glycine max
Glyma.08G146300 10.0kb downstream 10.0kb downstream 10000 false Chr08: 11126129-11136128 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301309 5265 Fabidae View MSA
124066778 5270 Rosid View MSA
123753457 5271 Pentapetalae View MSA
122789473 5272 Eudicot View MSA
122042297 5273 Angiosperm View MSA
121345801 5274 Embryophyte View MSA
123427802 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.158 0.0 50.6098   High
cufflinks 8.27243 0.0 46.8214   High
cufflinks 2.78522 0.0 14.9924    
cufflinks 2.20529 0.0 12.9592    
cufflinks 0.999667 0.0 7.02137    
cufflinks 0.861584 0.0 6.13904    
cufflinks 3.96744 0.0 29.437    
cufflinks 1.42928 0.0 14.5063    
cufflinks 0.277252 0.0 2.34932   Low
cufflinks 0.597        
cufflinks 0.049     Low  
cufflinks 0.782        
cufflinks 0.037     Low  
cufflinks 0.049     Low  
cufflinks 0.078        
cufflinks 5.115       High
cufflinks 0.01     Low Low
cufflinks 0.889        
cufflinks 1.409        
cufflinks 7.241     High High
cufflinks 0.025     Low Low
cufflinks 6.111       High
cufflinks 4.234       High
cufflinks 0.032     Low  
cufflinks 6.908       High
cufflinks 0.038     Low  

0 Strain