Gene : Glyma.08G137200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12151:SF1 - PROTEIN SCO1 HOMOLOG 2, MITOCHONDRIAL Genomic Order:  1372
Name:  ? Glyma.08G137200 Secondary Identifier:  ? PAC:30538732
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G137200 0.5kb upstream 0.5kb upstream 3829 true Chr08: 10479048-10482876 Glycine max
Glyma.08G137200 0.5kb upstream 0.5kb upstream 500 false Chr08: 10482377-10482876 Glycine max
Glyma.08G137200 0.5kb downstream 0.5kb downstream 3829 true Chr08: 10478548-10482376 Glycine max
Glyma.08G137200 0.5kb downstream 0.5kb downstream 500 false Chr08: 10478548-10479047 Glycine max
Glyma.08G137200 1.0kb upstream 1.0kb upstream 4329 true Chr08: 10479048-10483376 Glycine max
Glyma.08G137200 1.0kb upstream 1.0kb upstream 1000 false Chr08: 10482377-10483376 Glycine max
Glyma.08G137200 1.0kb downstream 1.0kb downstream 4329 true Chr08: 10478048-10482376 Glycine max
Glyma.08G137200 1.0kb downstream 1.0kb downstream 1000 false Chr08: 10478048-10479047 Glycine max
Glyma.08G137200 2.0kb upstream 2.0kb upstream 5329 true Chr08: 10479048-10484376 Glycine max
Glyma.08G137200 2.0kb upstream 2.0kb upstream 2000 false Chr08: 10482377-10484376 Glycine max
Glyma.08G137200 2.0kb downstream 2.0kb downstream 5329 true Chr08: 10477048-10482376 Glycine max
Glyma.08G137200 2.0kb downstream 2.0kb downstream 2000 false Chr08: 10477048-10479047 Glycine max
Glyma.08G137200 5.0kb upstream 5.0kb upstream 8329 true Chr08: 10479048-10487376 Glycine max
Glyma.08G137200 5.0kb upstream 5.0kb upstream 5000 false Chr08: 10482377-10487376 Glycine max
Glyma.08G137200 5.0kb downstream 5.0kb downstream 8329 true Chr08: 10474048-10482376 Glycine max
Glyma.08G137200 5.0kb downstream 5.0kb downstream 5000 false Chr08: 10474048-10479047 Glycine max
Glyma.08G137200 10.0kb upstream 10.0kb upstream 13329 true Chr08: 10479048-10492376 Glycine max
Glyma.08G137200 10.0kb upstream 10.0kb upstream 10000 false Chr08: 10482377-10492376 Glycine max
Glyma.08G137200 10.0kb downstream 10.0kb downstream 13329 true Chr08: 10469048-10482376 Glycine max
Glyma.08G137200 10.0kb downstream 10.0kb downstream 10000 false Chr08: 10469048-10479047 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310349 5265 Fabidae View MSA
124068864 5270 Rosid View MSA
123740394 5271 Pentapetalae View MSA
122793791 5272 Eudicot View MSA
122046621 5273 Angiosperm View MSA
121343822 5274 Embryophyte View MSA
123427619 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.94967 0.0 28.0721    
cufflinks 8.11536 0.0 23.4104    
cufflinks 11.7941 0.0 32.6083   High
cufflinks 8.01284 0.0 23.1357    
cufflinks 10.0016 0.0 28.1853    
cufflinks 9.73388 0.0 27.4724    
cufflinks 11.9785 0.0 33.2452   High
cufflinks 6.8022 0.0 20.074   Low
cufflinks 8.58262 0.0 24.5605    
cufflinks 1.745       Low
cufflinks 3.835       High
cufflinks 3.053        
cufflinks 3.765       High
cufflinks 3.68       High
cufflinks 2.925        
cufflinks 2.209        
cufflinks 1.581       Low
cufflinks 2.638        
cufflinks 3.07        
cufflinks 1.863       Low
cufflinks 2.344        
cufflinks 2.403        
cufflinks 2.754        
cufflinks 2.875        
cufflinks 1.972        
cufflinks 2.273        

0 Strain