Gene : Glyma.08G134800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR15139 - TUBULIN FOLDING COFACTOR C Genomic Order:  1348
Name:  ? Glyma.08G134800 Secondary Identifier:  ? PAC:30536494
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G134800 0.5kb upstream 0.5kb upstream 2051 true Chr08: 10341196-10343246 Glycine max
Glyma.08G134800 0.5kb upstream 0.5kb upstream 500 false Chr08: 10342747-10343246 Glycine max
Glyma.08G134800 0.5kb downstream 0.5kb downstream 2051 true Chr08: 10340696-10342746 Glycine max
Glyma.08G134800 0.5kb downstream 0.5kb downstream 500 false Chr08: 10340696-10341195 Glycine max
Glyma.08G134800 1.0kb upstream 1.0kb upstream 2551 true Chr08: 10341196-10343746 Glycine max
Glyma.08G134800 1.0kb upstream 1.0kb upstream 1000 false Chr08: 10342747-10343746 Glycine max
Glyma.08G134800 1.0kb downstream 1.0kb downstream 2551 true Chr08: 10340196-10342746 Glycine max
Glyma.08G134800 1.0kb downstream 1.0kb downstream 1000 false Chr08: 10340196-10341195 Glycine max
Glyma.08G134800 2.0kb upstream 2.0kb upstream 3551 true Chr08: 10341196-10344746 Glycine max
Glyma.08G134800 2.0kb upstream 2.0kb upstream 2000 false Chr08: 10342747-10344746 Glycine max
Glyma.08G134800 2.0kb downstream 2.0kb downstream 3551 true Chr08: 10339196-10342746 Glycine max
Glyma.08G134800 2.0kb downstream 2.0kb downstream 2000 false Chr08: 10339196-10341195 Glycine max
Glyma.08G134800 5.0kb upstream 5.0kb upstream 6551 true Chr08: 10341196-10347746 Glycine max
Glyma.08G134800 5.0kb upstream 5.0kb upstream 5000 false Chr08: 10342747-10347746 Glycine max
Glyma.08G134800 5.0kb downstream 5.0kb downstream 6551 true Chr08: 10336196-10342746 Glycine max
Glyma.08G134800 5.0kb downstream 5.0kb downstream 5000 false Chr08: 10336196-10341195 Glycine max
Glyma.08G134800 10.0kb upstream 10.0kb upstream 11551 true Chr08: 10341196-10352746 Glycine max
Glyma.08G134800 10.0kb upstream 10.0kb upstream 10000 false Chr08: 10342747-10352746 Glycine max
Glyma.08G134800 10.0kb downstream 10.0kb downstream 11551 true Chr08: 10331196-10342746 Glycine max
Glyma.08G134800 10.0kb downstream 10.0kb downstream 10000 false Chr08: 10331196-10341195 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306322 5265 Fabidae View MSA
124069115 5270 Rosid View MSA
123737356 5271 Pentapetalae View MSA
122788060 5272 Eudicot View MSA
122045521 5273 Angiosperm View MSA
121344345 5274 Embryophyte View MSA
123426531 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.93293 0.0 22.4201   Low
cufflinks 11.9591 0.0 32.6608    
cufflinks 5.74113 0.0 16.9917   Low
cufflinks 16.1112 0.0 43.2941    
cufflinks 18.0181 0.0 48.1863    
cufflinks 13.8295 0.0 37.3858    
cufflinks 36.7257 0.0 99.1696 High High
cufflinks 17.5265 0.0 46.9765    
cufflinks 11.886 0.0 32.4196    
cufflinks 19.032     High High
cufflinks 2.632       Low
cufflinks 7.35     High  
cufflinks 14.217     High High
cufflinks 18.372     High High
cufflinks 2.038       Low
cufflinks 5.568        
cufflinks 14.892     High High
cufflinks 7.585     High  
cufflinks 9.146     High  
cufflinks 4.872        
cufflinks 2.951       Low
cufflinks 4.686        
cufflinks 8.035     High  
cufflinks 3.758        
cufflinks 4.319        
cufflinks 3.54        

0 Strain