Gene : Glyma.08G135200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR23335:SF0 - CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR, ISOFORM F Genomic Order:  1352
Name:  ? Glyma.08G135200 Secondary Identifier:  ? PAC:30537979
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G135200 0.5kb upstream 0.5kb upstream 8507 true Chr08: 10358016-10366522 Glycine max
Glyma.08G135200 0.5kb upstream 0.5kb upstream 500 false Chr08: 10366023-10366522 Glycine max
Glyma.08G135200 0.5kb downstream 0.5kb downstream 8507 true Chr08: 10357516-10366022 Glycine max
Glyma.08G135200 0.5kb downstream 0.5kb downstream 500 false Chr08: 10357516-10358015 Glycine max
Glyma.08G135200 1.0kb upstream 1.0kb upstream 9007 true Chr08: 10358016-10367022 Glycine max
Glyma.08G135200 1.0kb upstream 1.0kb upstream 1000 false Chr08: 10366023-10367022 Glycine max
Glyma.08G135200 1.0kb downstream 1.0kb downstream 9007 true Chr08: 10357016-10366022 Glycine max
Glyma.08G135200 1.0kb downstream 1.0kb downstream 1000 false Chr08: 10357016-10358015 Glycine max
Glyma.08G135200 2.0kb upstream 2.0kb upstream 10007 true Chr08: 10358016-10368022 Glycine max
Glyma.08G135200 2.0kb upstream 2.0kb upstream 2000 false Chr08: 10366023-10368022 Glycine max
Glyma.08G135200 2.0kb downstream 2.0kb downstream 10007 true Chr08: 10356016-10366022 Glycine max
Glyma.08G135200 2.0kb downstream 2.0kb downstream 2000 false Chr08: 10356016-10358015 Glycine max
Glyma.08G135200 5.0kb upstream 5.0kb upstream 13007 true Chr08: 10358016-10371022 Glycine max
Glyma.08G135200 5.0kb upstream 5.0kb upstream 5000 false Chr08: 10366023-10371022 Glycine max
Glyma.08G135200 5.0kb downstream 5.0kb downstream 13007 true Chr08: 10353016-10366022 Glycine max
Glyma.08G135200 5.0kb downstream 5.0kb downstream 5000 false Chr08: 10353016-10358015 Glycine max
Glyma.08G135200 10.0kb upstream 10.0kb upstream 18007 true Chr08: 10358016-10376022 Glycine max
Glyma.08G135200 10.0kb upstream 10.0kb upstream 10000 false Chr08: 10366023-10376022 Glycine max
Glyma.08G135200 10.0kb downstream 10.0kb downstream 18007 true Chr08: 10348016-10366022 Glycine max
Glyma.08G135200 10.0kb downstream 10.0kb downstream 10000 false Chr08: 10348016-10358015 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310987 5265 Fabidae View MSA
124071259 5270 Rosid View MSA
123742819 5271 Pentapetalae View MSA
122795418 5272 Eudicot View MSA
122048924 5273 Angiosperm View MSA
121350175 5274 Embryophyte View MSA
123427695 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.74607 0.0 16.937   High
cufflinks 1.92147 0.0 7.20967    
cufflinks 3.30818 0.0 12.3449    
cufflinks 1.78812 0.0 6.75178    
cufflinks 1.22539 0.0 5.35551    
cufflinks 4.3103 0.0 15.4757   High
cufflinks 1.176 0.0 3.96149   Low
cufflinks 1.39358 0.0 5.79521    
cufflinks 1.39746 0.0 4.33845    
cufflinks 6.013       High
cufflinks 3.501        
cufflinks 1.364        
cufflinks 1.206        
cufflinks 0.386       Low
cufflinks 2.487        
cufflinks 0.863        
cufflinks 17.436     High High
cufflinks 0.892        
cufflinks 0.741        
cufflinks 0.59       Low
cufflinks 2.037        
cufflinks 0.762        
cufflinks 1.663        
cufflinks 2.362        
cufflinks 0.563       Low
cufflinks 6.089       High

0 Strain