Gene : Glyma.08G135600 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR32370:SF37 - BTB/POZ DOMAIN-CONTAINING PROTEIN DOT3-RELATED Genomic Order:  1356
Name:  ? Glyma.08G135600 Secondary Identifier:  ? PAC:30539225
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G135600 0.5kb upstream 0.5kb upstream 4944 true Chr08: 10382232-10387175 Glycine max
Glyma.08G135600 0.5kb upstream 0.5kb upstream 500 false Chr08: 10382232-10382731 Glycine max
Glyma.08G135600 0.5kb downstream 0.5kb downstream 4944 true Chr08: 10382732-10387675 Glycine max
Glyma.08G135600 0.5kb downstream 0.5kb downstream 500 false Chr08: 10387176-10387675 Glycine max
Glyma.08G135600 1.0kb upstream 1.0kb upstream 5444 true Chr08: 10381732-10387175 Glycine max
Glyma.08G135600 1.0kb upstream 1.0kb upstream 1000 false Chr08: 10381732-10382731 Glycine max
Glyma.08G135600 1.0kb downstream 1.0kb downstream 5444 true Chr08: 10382732-10388175 Glycine max
Glyma.08G135600 1.0kb downstream 1.0kb downstream 1000 false Chr08: 10387176-10388175 Glycine max
Glyma.08G135600 2.0kb upstream 2.0kb upstream 6444 true Chr08: 10380732-10387175 Glycine max
Glyma.08G135600 2.0kb upstream 2.0kb upstream 2000 false Chr08: 10380732-10382731 Glycine max
Glyma.08G135600 2.0kb downstream 2.0kb downstream 6444 true Chr08: 10382732-10389175 Glycine max
Glyma.08G135600 2.0kb downstream 2.0kb downstream 2000 false Chr08: 10387176-10389175 Glycine max
Glyma.08G135600 5.0kb upstream 5.0kb upstream 9444 true Chr08: 10377732-10387175 Glycine max
Glyma.08G135600 5.0kb upstream 5.0kb upstream 5000 false Chr08: 10377732-10382731 Glycine max
Glyma.08G135600 5.0kb downstream 5.0kb downstream 9444 true Chr08: 10382732-10392175 Glycine max
Glyma.08G135600 5.0kb downstream 5.0kb downstream 5000 false Chr08: 10387176-10392175 Glycine max
Glyma.08G135600 10.0kb upstream 10.0kb upstream 14444 true Chr08: 10372732-10387175 Glycine max
Glyma.08G135600 10.0kb upstream 10.0kb upstream 10000 false Chr08: 10372732-10382731 Glycine max
Glyma.08G135600 10.0kb downstream 10.0kb downstream 14444 true Chr08: 10382732-10397175 Glycine max
Glyma.08G135600 10.0kb downstream 10.0kb downstream 10000 false Chr08: 10387176-10397175 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302011 5265 Fabidae View MSA
124072308 5270 Rosid View MSA
123746549 5271 Pentapetalae View MSA
122794613 5272 Eudicot View MSA
122049761 5273 Angiosperm View MSA
121347435 5274 Embryophyte View MSA
123380549 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.18376 0.0 16.4758    
cufflinks 4.1775 0.0 16.4097    
cufflinks 1.13081 0.0 5.61557    
cufflinks 4.57535 0.0 17.9058    
cufflinks 0.0166745 0.0 0.0742872 Low Low
cufflinks 0.269384 0.0 1.34286 Low  
cufflinks 2.65756 0.0 8.05991    
cufflinks 1.15525 0.0 4.30416    
cufflinks 0.0168725 0.0 0.076303 Low Low
cufflinks 0.423        
cufflinks 0.002     Low Low
cufflinks 1.005        
cufflinks 0.009     Low  
cufflinks 0.001     Low Low
cufflinks 0.002     Low Low
cufflinks 1.245        
cufflinks 0.002     Low Low
cufflinks 1.308        
cufflinks 1.023        
cufflinks 1.665        
cufflinks 0.002     Low Low
cufflinks 1.732        
cufflinks 1.823        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.96        
cufflinks 0.003     Low Low

0 Strain