Gene : Glyma.08G124200 G. max Wm82.a2.v1
Defline:  (1 of 21) PTHR12632 - TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED Genomic Order:  1242
Name:  ? Glyma.08G124200 Secondary Identifier:  ? PAC:30539117
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G124200 0.5kb upstream 0.5kb upstream 4696 true Chr08: 9530863-9535558 Glycine max
Glyma.08G124200 0.5kb upstream 0.5kb upstream 500 false Chr08: 9530863-9531362 Glycine max
Glyma.08G124200 0.5kb downstream 0.5kb downstream 4696 true Chr08: 9531363-9536058 Glycine max
Glyma.08G124200 0.5kb downstream 0.5kb downstream 500 false Chr08: 9535559-9536058 Glycine max
Glyma.08G124200 1.0kb upstream 1.0kb upstream 5196 true Chr08: 9530363-9535558 Glycine max
Glyma.08G124200 1.0kb upstream 1.0kb upstream 1000 false Chr08: 9530363-9531362 Glycine max
Glyma.08G124200 1.0kb downstream 1.0kb downstream 5196 true Chr08: 9531363-9536558 Glycine max
Glyma.08G124200 1.0kb downstream 1.0kb downstream 1000 false Chr08: 9535559-9536558 Glycine max
Glyma.08G124200 2.0kb upstream 2.0kb upstream 6196 true Chr08: 9529363-9535558 Glycine max
Glyma.08G124200 2.0kb upstream 2.0kb upstream 2000 false Chr08: 9529363-9531362 Glycine max
Glyma.08G124200 2.0kb downstream 2.0kb downstream 6196 true Chr08: 9531363-9537558 Glycine max
Glyma.08G124200 2.0kb downstream 2.0kb downstream 2000 false Chr08: 9535559-9537558 Glycine max
Glyma.08G124200 5.0kb upstream 5.0kb upstream 9196 true Chr08: 9526363-9535558 Glycine max
Glyma.08G124200 5.0kb upstream 5.0kb upstream 5000 false Chr08: 9526363-9531362 Glycine max
Glyma.08G124200 5.0kb downstream 5.0kb downstream 9196 true Chr08: 9531363-9540558 Glycine max
Glyma.08G124200 5.0kb downstream 5.0kb downstream 5000 false Chr08: 9535559-9540558 Glycine max
Glyma.08G124200 10.0kb upstream 10.0kb upstream 14196 true Chr08: 9521363-9535558 Glycine max
Glyma.08G124200 10.0kb upstream 10.0kb upstream 10000 false Chr08: 9521363-9531362 Glycine max
Glyma.08G124200 10.0kb downstream 10.0kb downstream 14196 true Chr08: 9531363-9545558 Glycine max
Glyma.08G124200 10.0kb downstream 10.0kb downstream 10000 false Chr08: 9535559-9545558 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309024 5265 Fabidae View MSA
124071541 5270 Rosid View MSA
123747394 5271 Pentapetalae View MSA
122791430 5272 Eudicot View MSA
122049545 5273 Angiosperm View MSA
121349728 5274 Embryophyte View MSA
123424382 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.6818 0.0 71.7117   High
cufflinks 14.9626 0.0 58.0138    
cufflinks 23.118 0.0 86.838 High High
cufflinks 12.2886 0.0 49.5814    
cufflinks 5.80787 0.0 25.7057   Low
cufflinks 7.8769 0.0 31.7968    
cufflinks 10.502 0.0 44.5576    
cufflinks 9.76234 0.0 41.5815    
cufflinks 7.88874 0.0 31.7735    
cufflinks 0.993        
cufflinks 1.165        
cufflinks 1.956       High
cufflinks 0.804       Low
cufflinks 0.605       Low
cufflinks 1.107        
cufflinks 1.727        
cufflinks 0.665       Low
cufflinks 1.557        
cufflinks 1.597        
cufflinks 1.47        
cufflinks 0.918        
cufflinks 1.65        
cufflinks 1.707        
cufflinks 1.06        
cufflinks 1.831       High
cufflinks 0.842        

0 Strain