Gene : Glyma.08G126700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR18896//PTHR18896:SF71 - PHOSPHOLIPASE D Genomic Order:  1267
Name:  ? Glyma.08G126700 Secondary Identifier:  ? PAC:30540908
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax LIPASYN-PWY Glycine max pathologic  
Gmax PWY-3561 Glycine max pathologic  
Gmax PWY-7039 Glycine max pathologic  

Genomics

Gene Ontology Displayer

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Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G126700 0.5kb upstream 0.5kb upstream 9972 true Chr08: 9760166-9770137 Glycine max
Glyma.08G126700 0.5kb upstream 0.5kb upstream 500 false Chr08: 9769638-9770137 Glycine max
Glyma.08G126700 0.5kb downstream 0.5kb downstream 9972 true Chr08: 9759666-9769637 Glycine max
Glyma.08G126700 0.5kb downstream 0.5kb downstream 500 false Chr08: 9759666-9760165 Glycine max
Glyma.08G126700 1.0kb upstream 1.0kb upstream 10472 true Chr08: 9760166-9770637 Glycine max
Glyma.08G126700 1.0kb upstream 1.0kb upstream 1000 false Chr08: 9769638-9770637 Glycine max
Glyma.08G126700 1.0kb downstream 1.0kb downstream 10472 true Chr08: 9759166-9769637 Glycine max
Glyma.08G126700 1.0kb downstream 1.0kb downstream 1000 false Chr08: 9759166-9760165 Glycine max
Glyma.08G126700 2.0kb upstream 2.0kb upstream 11472 true Chr08: 9760166-9771637 Glycine max
Glyma.08G126700 2.0kb upstream 2.0kb upstream 2000 false Chr08: 9769638-9771637 Glycine max
Glyma.08G126700 2.0kb downstream 2.0kb downstream 11472 true Chr08: 9758166-9769637 Glycine max
Glyma.08G126700 2.0kb downstream 2.0kb downstream 2000 false Chr08: 9758166-9760165 Glycine max
Glyma.08G126700 5.0kb upstream 5.0kb upstream 14472 true Chr08: 9760166-9774637 Glycine max
Glyma.08G126700 5.0kb upstream 5.0kb upstream 5000 false Chr08: 9769638-9774637 Glycine max
Glyma.08G126700 5.0kb downstream 5.0kb downstream 14472 true Chr08: 9755166-9769637 Glycine max
Glyma.08G126700 5.0kb downstream 5.0kb downstream 5000 false Chr08: 9755166-9760165 Glycine max
Glyma.08G126700 10.0kb upstream 10.0kb upstream 19472 true Chr08: 9760166-9779637 Glycine max
Glyma.08G126700 10.0kb upstream 10.0kb upstream 10000 false Chr08: 9769638-9779637 Glycine max
Glyma.08G126700 10.0kb downstream 10.0kb downstream 19472 true Chr08: 9750166-9769637 Glycine max
Glyma.08G126700 10.0kb downstream 10.0kb downstream 10000 false Chr08: 9750166-9760165 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306625 5265 Fabidae View MSA
124050548 5270 Rosid View MSA
123749606 5271 Pentapetalae View MSA
122795845 5272 Eudicot View MSA
122049262 5273 Angiosperm View MSA
121347041 5274 Embryophyte View MSA
123380485 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.35108 0.0 4.33052   High
cufflinks 0.0333169 0.0 0.134525 Low  
cufflinks 0.0882177 0.0 0.342939 Low  
cufflinks 0.0147423 0.0 0.0624155 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0134766 0.0 0.0574667 Low  
cufflinks 0.00682807 0.0 0.0308833 Low  
cufflinks 0.002     Low Low
cufflinks 0.002     Low Low
cufflinks 0.071     Low  
cufflinks 0.002     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.002     Low Low
cufflinks 0.234        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.392       High
cufflinks 0.014     Low  
cufflinks 0.284        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.209        
cufflinks 0.096     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.286        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain