Gene : Glyma.08G128400 G. max Wm82.a2.v1
Defline:  (1 of 105) PF13456 - Reverse transcriptase-like (RVT_3) Genomic Order:  1284
Name:  ? Glyma.08G128400 Secondary Identifier:  ? PAC:30540210
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G128400 0.5kb upstream 0.5kb upstream 812 true Chr08: 9899246-9900057 Glycine max
Glyma.08G128400 0.5kb upstream 0.5kb upstream 500 false Chr08: 9899246-9899745 Glycine max
Glyma.08G128400 0.5kb downstream 0.5kb downstream 812 true Chr08: 9899746-9900557 Glycine max
Glyma.08G128400 0.5kb downstream 0.5kb downstream 500 false Chr08: 9900058-9900557 Glycine max
Glyma.08G128400 1.0kb upstream 1.0kb upstream 1312 true Chr08: 9898746-9900057 Glycine max
Glyma.08G128400 1.0kb upstream 1.0kb upstream 1000 false Chr08: 9898746-9899745 Glycine max
Glyma.08G128400 1.0kb downstream 1.0kb downstream 1312 true Chr08: 9899746-9901057 Glycine max
Glyma.08G128400 1.0kb downstream 1.0kb downstream 1000 false Chr08: 9900058-9901057 Glycine max
Glyma.08G128400 2.0kb upstream 2.0kb upstream 2312 true Chr08: 9897746-9900057 Glycine max
Glyma.08G128400 2.0kb upstream 2.0kb upstream 2000 false Chr08: 9897746-9899745 Glycine max
Glyma.08G128400 2.0kb downstream 2.0kb downstream 2312 true Chr08: 9899746-9902057 Glycine max
Glyma.08G128400 2.0kb downstream 2.0kb downstream 2000 false Chr08: 9900058-9902057 Glycine max
Glyma.08G128400 5.0kb upstream 5.0kb upstream 5312 true Chr08: 9894746-9900057 Glycine max
Glyma.08G128400 5.0kb upstream 5.0kb upstream 5000 false Chr08: 9894746-9899745 Glycine max
Glyma.08G128400 5.0kb downstream 5.0kb downstream 5312 true Chr08: 9899746-9905057 Glycine max
Glyma.08G128400 5.0kb downstream 5.0kb downstream 5000 false Chr08: 9900058-9905057 Glycine max
Glyma.08G128400 10.0kb upstream 10.0kb upstream 10312 true Chr08: 9889746-9900057 Glycine max
Glyma.08G128400 10.0kb upstream 10.0kb upstream 10000 false Chr08: 9889746-9899745 Glycine max
Glyma.08G128400 10.0kb downstream 10.0kb downstream 10312 true Chr08: 9899746-9910057 Glycine max
Glyma.08G128400 10.0kb downstream 10.0kb downstream 10000 false Chr08: 9900058-9910057 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121614244 5273 Angiosperm Singleton cluster - no MSA
122248578 5265 Fabidae Singleton cluster - no MSA
123992150 5270 Rosid Singleton cluster - no MSA
123567041 5271 Pentapetalae Singleton cluster - no MSA
122601794 5272 Eudicot Singleton cluster - no MSA
120886452 5274 Embryophyte Singleton cluster - no MSA
122927222 5275 Viridiplantae Singleton cluster - no MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain