Gene : Glyma.08G167900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR13068//PTHR13068:SF22 - CGI-12 PROTEIN-RELATED Genomic Order:  1679
Name:  ? Glyma.08G167900 Secondary Identifier:  ? PAC:30540264
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G167900 0.5kb upstream 0.5kb upstream 4809 true Chr08: 13231495-13236303 Glycine max
Glyma.08G167900 0.5kb upstream 0.5kb upstream 500 false Chr08: 13231495-13231994 Glycine max
Glyma.08G167900 0.5kb downstream 0.5kb downstream 4809 true Chr08: 13231995-13236803 Glycine max
Glyma.08G167900 0.5kb downstream 0.5kb downstream 500 false Chr08: 13236304-13236803 Glycine max
Glyma.08G167900 1.0kb upstream 1.0kb upstream 5309 true Chr08: 13230995-13236303 Glycine max
Glyma.08G167900 1.0kb upstream 1.0kb upstream 1000 false Chr08: 13230995-13231994 Glycine max
Glyma.08G167900 1.0kb downstream 1.0kb downstream 5309 true Chr08: 13231995-13237303 Glycine max
Glyma.08G167900 1.0kb downstream 1.0kb downstream 1000 false Chr08: 13236304-13237303 Glycine max
Glyma.08G167900 2.0kb upstream 2.0kb upstream 6309 true Chr08: 13229995-13236303 Glycine max
Glyma.08G167900 2.0kb upstream 2.0kb upstream 2000 false Chr08: 13229995-13231994 Glycine max
Glyma.08G167900 2.0kb downstream 2.0kb downstream 6309 true Chr08: 13231995-13238303 Glycine max
Glyma.08G167900 2.0kb downstream 2.0kb downstream 2000 false Chr08: 13236304-13238303 Glycine max
Glyma.08G167900 5.0kb upstream 5.0kb upstream 9309 true Chr08: 13226995-13236303 Glycine max
Glyma.08G167900 5.0kb upstream 5.0kb upstream 5000 false Chr08: 13226995-13231994 Glycine max
Glyma.08G167900 5.0kb downstream 5.0kb downstream 9309 true Chr08: 13231995-13241303 Glycine max
Glyma.08G167900 5.0kb downstream 5.0kb downstream 5000 false Chr08: 13236304-13241303 Glycine max
Glyma.08G167900 10.0kb upstream 10.0kb upstream 14309 true Chr08: 13221995-13236303 Glycine max
Glyma.08G167900 10.0kb upstream 10.0kb upstream 10000 false Chr08: 13221995-13231994 Glycine max
Glyma.08G167900 10.0kb downstream 10.0kb downstream 14309 true Chr08: 13231995-13246303 Glycine max
Glyma.08G167900 10.0kb downstream 10.0kb downstream 10000 false Chr08: 13236304-13246303 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305057 5265 Fabidae View MSA
124067504 5270 Rosid View MSA
123741152 5271 Pentapetalae View MSA
122793489 5272 Eudicot View MSA
122047592 5273 Angiosperm View MSA
121347961 5274 Embryophyte View MSA
123427998 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.8093 0.0 34.595   High
cufflinks 7.66909 0.0 21.4701    
cufflinks 5.01964 0.0 14.7612    
cufflinks 4.76143 0.0 14.1209    
cufflinks 1.58798 0.0 5.46483    
cufflinks 0.887267 0.0 3.19492   Low
cufflinks 8.78238 0.0 24.3499    
cufflinks 2.79041 0.0 8.91611    
cufflinks 1.40474 0.0 4.87912   Low
cufflinks 1.209        
cufflinks 0.171       Low
cufflinks 2.107        
cufflinks 0.206        
cufflinks 0.142       Low
cufflinks 0.671        
cufflinks 9.291     High High
cufflinks 0.105       Low
cufflinks 1.862        
cufflinks 2.895        
cufflinks 9.894     High High
cufflinks 0.202        
cufflinks 10.19     High High
cufflinks 4.662        
cufflinks 0.226        
cufflinks 11.262     High High
cufflinks 0.139       Low

0 Strain