Gene : Glyma.08G173200 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR12496 - CGI-41 METHYLTRANSFERASE Genomic Order:  1732
Name:  ? Glyma.08G173200 Secondary Identifier:  ? PAC:30540390
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G173200 0.5kb upstream 0.5kb upstream 10584 true Chr08: 13778253-13788836 Glycine max
Glyma.08G173200 0.5kb upstream 0.5kb upstream 500 false Chr08: 13778253-13778752 Glycine max
Glyma.08G173200 0.5kb downstream 0.5kb downstream 10584 true Chr08: 13778753-13789336 Glycine max
Glyma.08G173200 0.5kb downstream 0.5kb downstream 500 false Chr08: 13788837-13789336 Glycine max
Glyma.08G173200 1.0kb upstream 1.0kb upstream 11084 true Chr08: 13777753-13788836 Glycine max
Glyma.08G173200 1.0kb upstream 1.0kb upstream 1000 false Chr08: 13777753-13778752 Glycine max
Glyma.08G173200 1.0kb downstream 1.0kb downstream 11084 true Chr08: 13778753-13789836 Glycine max
Glyma.08G173200 1.0kb downstream 1.0kb downstream 1000 false Chr08: 13788837-13789836 Glycine max
Glyma.08G173200 2.0kb upstream 2.0kb upstream 12084 true Chr08: 13776753-13788836 Glycine max
Glyma.08G173200 2.0kb upstream 2.0kb upstream 2000 false Chr08: 13776753-13778752 Glycine max
Glyma.08G173200 2.0kb downstream 2.0kb downstream 12084 true Chr08: 13778753-13790836 Glycine max
Glyma.08G173200 2.0kb downstream 2.0kb downstream 2000 false Chr08: 13788837-13790836 Glycine max
Glyma.08G173200 5.0kb upstream 5.0kb upstream 15084 true Chr08: 13773753-13788836 Glycine max
Glyma.08G173200 5.0kb upstream 5.0kb upstream 5000 false Chr08: 13773753-13778752 Glycine max
Glyma.08G173200 5.0kb downstream 5.0kb downstream 15084 true Chr08: 13778753-13793836 Glycine max
Glyma.08G173200 5.0kb downstream 5.0kb downstream 5000 false Chr08: 13788837-13793836 Glycine max
Glyma.08G173200 10.0kb upstream 10.0kb upstream 20084 true Chr08: 13768753-13788836 Glycine max
Glyma.08G173200 10.0kb upstream 10.0kb upstream 10000 false Chr08: 13768753-13778752 Glycine max
Glyma.08G173200 10.0kb downstream 10.0kb downstream 20084 true Chr08: 13778753-13798836 Glycine max
Glyma.08G173200 10.0kb downstream 10.0kb downstream 10000 false Chr08: 13788837-13798836 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041435 5273 Angiosperm View MSA
122308267 5265 Fabidae View MSA
124063111 5270 Rosid View MSA
123747553 5271 Pentapetalae View MSA
122789277 5272 Eudicot View MSA
121344340 5274 Embryophyte View MSA
123380024 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.72158 0.0 15.4187   Low
cufflinks 4.84701 0.0 18.9044    
cufflinks 4.99519 0.0 19.0208    
cufflinks 3.74163 0.0 15.1731    
cufflinks 4.35372 0.0 17.2222    
cufflinks 2.8487 0.0 10.6286   Low
cufflinks 5.78787 0.0 24.1188   High
cufflinks 4.0211 0.0 15.9773    
cufflinks 3.84747 0.0 15.5365    
cufflinks 0.206        
cufflinks 0.038     Low Low
cufflinks 0.28        
cufflinks 0.261        
cufflinks 0.349       High
cufflinks 0.062       Low
cufflinks 0.195        
cufflinks 0.11        
cufflinks 0.385       High
cufflinks 0.291        
cufflinks 0.206        
cufflinks 0.049     Low Low
cufflinks 0.238        
cufflinks 0.207        
cufflinks 0.056     Low Low
cufflinks 0.181        
cufflinks 0.068       Low

0 Strain