Gene : Glyma.08G161900 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR22600//PTHR22600:SF14 - BETA-HEXOSAMINIDASE Genomic Order:  1619
Name:  ? Glyma.08G161900 Secondary Identifier:  ? PAC:30541021
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-6902 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G161900 0.5kb upstream 0.5kb upstream 4229 true Chr08: 12580751-12584979 Glycine max
Glyma.08G161900 0.5kb upstream 0.5kb upstream 500 false Chr08: 12584480-12584979 Glycine max
Glyma.08G161900 0.5kb downstream 0.5kb downstream 4229 true Chr08: 12580251-12584479 Glycine max
Glyma.08G161900 0.5kb downstream 0.5kb downstream 500 false Chr08: 12580251-12580750 Glycine max
Glyma.08G161900 1.0kb upstream 1.0kb upstream 4729 true Chr08: 12580751-12585479 Glycine max
Glyma.08G161900 1.0kb upstream 1.0kb upstream 1000 false Chr08: 12584480-12585479 Glycine max
Glyma.08G161900 1.0kb downstream 1.0kb downstream 4729 true Chr08: 12579751-12584479 Glycine max
Glyma.08G161900 1.0kb downstream 1.0kb downstream 1000 false Chr08: 12579751-12580750 Glycine max
Glyma.08G161900 2.0kb upstream 2.0kb upstream 5729 true Chr08: 12580751-12586479 Glycine max
Glyma.08G161900 2.0kb upstream 2.0kb upstream 2000 false Chr08: 12584480-12586479 Glycine max
Glyma.08G161900 2.0kb downstream 2.0kb downstream 5729 true Chr08: 12578751-12584479 Glycine max
Glyma.08G161900 2.0kb downstream 2.0kb downstream 2000 false Chr08: 12578751-12580750 Glycine max
Glyma.08G161900 5.0kb upstream 5.0kb upstream 8729 true Chr08: 12580751-12589479 Glycine max
Glyma.08G161900 5.0kb upstream 5.0kb upstream 5000 false Chr08: 12584480-12589479 Glycine max
Glyma.08G161900 5.0kb downstream 5.0kb downstream 8729 true Chr08: 12575751-12584479 Glycine max
Glyma.08G161900 5.0kb downstream 5.0kb downstream 5000 false Chr08: 12575751-12580750 Glycine max
Glyma.08G161900 10.0kb upstream 10.0kb upstream 13729 true Chr08: 12580751-12594479 Glycine max
Glyma.08G161900 10.0kb upstream 10.0kb upstream 10000 false Chr08: 12584480-12594479 Glycine max
Glyma.08G161900 10.0kb downstream 10.0kb downstream 13729 true Chr08: 12570751-12584479 Glycine max
Glyma.08G161900 10.0kb downstream 10.0kb downstream 10000 false Chr08: 12570751-12580750 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303114 5265 Fabidae View MSA
124063455 5270 Rosid View MSA
123738859 5271 Pentapetalae View MSA
122789804 5272 Eudicot View MSA
122047899 5273 Angiosperm View MSA
121347698 5274 Embryophyte View MSA
123428053 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.369363 0.0 1.37163   Low
cufflinks 2.88269 0.0 8.76522   High
cufflinks 2.30626 0.0 7.23145    
cufflinks 1.34466 0.0 4.53051    
cufflinks 0.777187 0.0 2.75723    
cufflinks 1.79194 0.0 5.81767    
cufflinks 1.46969 0.0 4.88599    
cufflinks 2.85671 0.0 8.65597   High
cufflinks 0.998704 0.0 3.47192    
cufflinks 1.371       High
cufflinks 0.069       Low
cufflinks 0.894        
cufflinks 0.559        
cufflinks 0.584        
cufflinks 0.01     Low Low
cufflinks 0.387        
cufflinks 0.248        
cufflinks 0.633        
cufflinks 1.705       High
cufflinks 0.368        
cufflinks 0.061     Low Low
cufflinks 0.407        
cufflinks 1.012        
cufflinks 0.042     Low Low
cufflinks 0.451        
cufflinks 0.12        

0 Strain