Gene : Glyma.08G163500 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR31499:SF2 - MYB FAMILY TRANSCRIPTION FACTOR APL Genomic Order:  1635
Name:  ? Glyma.08G163500 Secondary Identifier:  ? PAC:30537671
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G163500 0.5kb upstream 0.5kb upstream 3213 true Chr08: 12850239-12853451 Glycine max
Glyma.08G163500 0.5kb upstream 0.5kb upstream 500 false Chr08: 12850239-12850738 Glycine max
Glyma.08G163500 0.5kb downstream 0.5kb downstream 3213 true Chr08: 12850739-12853951 Glycine max
Glyma.08G163500 0.5kb downstream 0.5kb downstream 500 false Chr08: 12853452-12853951 Glycine max
Glyma.08G163500 1.0kb upstream 1.0kb upstream 3713 true Chr08: 12849739-12853451 Glycine max
Glyma.08G163500 1.0kb upstream 1.0kb upstream 1000 false Chr08: 12849739-12850738 Glycine max
Glyma.08G163500 1.0kb downstream 1.0kb downstream 3713 true Chr08: 12850739-12854451 Glycine max
Glyma.08G163500 1.0kb downstream 1.0kb downstream 1000 false Chr08: 12853452-12854451 Glycine max
Glyma.08G163500 2.0kb upstream 2.0kb upstream 4713 true Chr08: 12848739-12853451 Glycine max
Glyma.08G163500 2.0kb upstream 2.0kb upstream 2000 false Chr08: 12848739-12850738 Glycine max
Glyma.08G163500 2.0kb downstream 2.0kb downstream 4713 true Chr08: 12850739-12855451 Glycine max
Glyma.08G163500 2.0kb downstream 2.0kb downstream 2000 false Chr08: 12853452-12855451 Glycine max
Glyma.08G163500 5.0kb upstream 5.0kb upstream 7713 true Chr08: 12845739-12853451 Glycine max
Glyma.08G163500 5.0kb upstream 5.0kb upstream 5000 false Chr08: 12845739-12850738 Glycine max
Glyma.08G163500 5.0kb downstream 5.0kb downstream 7713 true Chr08: 12850739-12858451 Glycine max
Glyma.08G163500 5.0kb downstream 5.0kb downstream 5000 false Chr08: 12853452-12858451 Glycine max
Glyma.08G163500 10.0kb upstream 10.0kb upstream 12713 true Chr08: 12840739-12853451 Glycine max
Glyma.08G163500 10.0kb upstream 10.0kb upstream 10000 false Chr08: 12840739-12850738 Glycine max
Glyma.08G163500 10.0kb downstream 10.0kb downstream 12713 true Chr08: 12850739-12863451 Glycine max
Glyma.08G163500 10.0kb downstream 10.0kb downstream 10000 false Chr08: 12853452-12863451 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300499 5265 Fabidae View MSA
124061276 5270 Rosid View MSA
123738186 5271 Pentapetalae View MSA
122787106 5272 Eudicot View MSA
122046288 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121350891 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.475 0.0 53.8884   High
cufflinks 3.29368 0.0 13.808    
cufflinks 15.5175 0.0 53.2599   High
cufflinks 2.89763 0.0 12.5533    
cufflinks 3.76525 0.0 18.8296    
cufflinks 1.10808 0.0 6.20104   Low
cufflinks 3.15016 0.0 13.3252    
cufflinks 6.45337 0.0 21.8764    
cufflinks 4.89039 0.0 22.4177    
cufflinks 2.144        
cufflinks 2.079        
cufflinks 4.453       High
cufflinks 1.053        
cufflinks 0.758        
cufflinks 0.184       Low
cufflinks 2.129        
cufflinks 0.801        
cufflinks 4.459       High
cufflinks 0.535       Low
cufflinks 3.299        
cufflinks 2.03        
cufflinks 3.059        
cufflinks 2.523        
cufflinks 1.791        
cufflinks 2.651        
cufflinks 1.066        

0 Strain