Gene : Glyma.08G165800 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR23257:SF438 - F3O9.7 PROTEIN-RELATED Genomic Order:  1658
Name:  ? Glyma.08G165800 Secondary Identifier:  ? PAC:30539320
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G165800 0.5kb upstream 0.5kb upstream 8535 true Chr08: 13073507-13082041 Glycine max
Glyma.08G165800 0.5kb upstream 0.5kb upstream 500 false Chr08: 13081542-13082041 Glycine max
Glyma.08G165800 0.5kb downstream 0.5kb downstream 8535 true Chr08: 13073007-13081541 Glycine max
Glyma.08G165800 0.5kb downstream 0.5kb downstream 500 false Chr08: 13073007-13073506 Glycine max
Glyma.08G165800 1.0kb upstream 1.0kb upstream 9035 true Chr08: 13073507-13082541 Glycine max
Glyma.08G165800 1.0kb upstream 1.0kb upstream 1000 false Chr08: 13081542-13082541 Glycine max
Glyma.08G165800 1.0kb downstream 1.0kb downstream 9035 true Chr08: 13072507-13081541 Glycine max
Glyma.08G165800 1.0kb downstream 1.0kb downstream 1000 false Chr08: 13072507-13073506 Glycine max
Glyma.08G165800 2.0kb upstream 2.0kb upstream 10035 true Chr08: 13073507-13083541 Glycine max
Glyma.08G165800 2.0kb upstream 2.0kb upstream 2000 false Chr08: 13081542-13083541 Glycine max
Glyma.08G165800 2.0kb downstream 2.0kb downstream 10035 true Chr08: 13071507-13081541 Glycine max
Glyma.08G165800 2.0kb downstream 2.0kb downstream 2000 false Chr08: 13071507-13073506 Glycine max
Glyma.08G165800 5.0kb upstream 5.0kb upstream 13035 true Chr08: 13073507-13086541 Glycine max
Glyma.08G165800 5.0kb upstream 5.0kb upstream 5000 false Chr08: 13081542-13086541 Glycine max
Glyma.08G165800 5.0kb downstream 5.0kb downstream 13035 true Chr08: 13068507-13081541 Glycine max
Glyma.08G165800 5.0kb downstream 5.0kb downstream 5000 false Chr08: 13068507-13073506 Glycine max
Glyma.08G165800 10.0kb upstream 10.0kb upstream 18035 true Chr08: 13073507-13091541 Glycine max
Glyma.08G165800 10.0kb upstream 10.0kb upstream 10000 false Chr08: 13081542-13091541 Glycine max
Glyma.08G165800 10.0kb downstream 10.0kb downstream 18035 true Chr08: 13063507-13081541 Glycine max
Glyma.08G165800 10.0kb downstream 10.0kb downstream 10000 false Chr08: 13063507-13073506 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309472 5265 Fabidae View MSA
124066314 5270 Rosid View MSA
123749730 5271 Pentapetalae View MSA
122796699 5272 Eudicot View MSA
122043276 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121350927 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 41.8867 0.0 183.895 High  
cufflinks 16.2199 0.0 53.3738   Low
cufflinks 51.7682 0.0 255.086 High High
cufflinks 34.3203 0.0 140.61 High  
cufflinks 20.4811 0.0 70.7572 High Low
cufflinks 45.8653 0.0 210.362 High  
cufflinks 34.8024 0.0 141.489 High  
cufflinks 46.7216 0.0 217.543 High  
cufflinks 29.5867 0.0 114.092 High  
cufflinks 10.891     High  
cufflinks 9.874     High  
cufflinks 10.213     High  
cufflinks 8.559     High  
cufflinks 5.708       Low
cufflinks 13.835     High High
cufflinks 10.679     High  
cufflinks 8.96     High  
cufflinks 7.914     High  
cufflinks 5.686       Low
cufflinks 12.153     High  
cufflinks 13.005     High High
cufflinks 12.453     High  
cufflinks 7.427       Low
cufflinks 12.232     High  
cufflinks 11.427     High  
cufflinks 12.327     High  

0 Strain