Gene : Glyma.08G160900 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR11384:SF3 - INNER MEMBRANE ABC TRANSPORTER ATP-BINDING PROTEIN YDDA-RELATED Genomic Order:  1609
Name:  ? Glyma.08G160900 Secondary Identifier:  ? PAC:30536700
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G160900 0.5kb upstream 0.5kb upstream 7103 true Chr08: 12447456-12454558 Glycine max
Glyma.08G160900 0.5kb upstream 0.5kb upstream 500 false Chr08: 12447456-12447955 Glycine max
Glyma.08G160900 0.5kb downstream 0.5kb downstream 7103 true Chr08: 12447956-12455058 Glycine max
Glyma.08G160900 0.5kb downstream 0.5kb downstream 500 false Chr08: 12454559-12455058 Glycine max
Glyma.08G160900 1.0kb upstream 1.0kb upstream 7603 true Chr08: 12446956-12454558 Glycine max
Glyma.08G160900 1.0kb upstream 1.0kb upstream 1000 false Chr08: 12446956-12447955 Glycine max
Glyma.08G160900 1.0kb downstream 1.0kb downstream 7603 true Chr08: 12447956-12455558 Glycine max
Glyma.08G160900 1.0kb downstream 1.0kb downstream 1000 false Chr08: 12454559-12455558 Glycine max
Glyma.08G160900 2.0kb upstream 2.0kb upstream 8603 true Chr08: 12445956-12454558 Glycine max
Glyma.08G160900 2.0kb upstream 2.0kb upstream 2000 false Chr08: 12445956-12447955 Glycine max
Glyma.08G160900 2.0kb downstream 2.0kb downstream 8603 true Chr08: 12447956-12456558 Glycine max
Glyma.08G160900 2.0kb downstream 2.0kb downstream 2000 false Chr08: 12454559-12456558 Glycine max
Glyma.08G160900 5.0kb upstream 5.0kb upstream 11603 true Chr08: 12442956-12454558 Glycine max
Glyma.08G160900 5.0kb upstream 5.0kb upstream 5000 false Chr08: 12442956-12447955 Glycine max
Glyma.08G160900 5.0kb downstream 5.0kb downstream 11603 true Chr08: 12447956-12459558 Glycine max
Glyma.08G160900 5.0kb downstream 5.0kb downstream 5000 false Chr08: 12454559-12459558 Glycine max
Glyma.08G160900 10.0kb upstream 10.0kb upstream 16603 true Chr08: 12437956-12454558 Glycine max
Glyma.08G160900 10.0kb upstream 10.0kb upstream 10000 false Chr08: 12437956-12447955 Glycine max
Glyma.08G160900 10.0kb downstream 10.0kb downstream 16603 true Chr08: 12447956-12464558 Glycine max
Glyma.08G160900 10.0kb downstream 10.0kb downstream 10000 false Chr08: 12454559-12464558 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308749 5265 Fabidae View MSA
124064537 5270 Rosid View MSA
123737763 5271 Pentapetalae View MSA
122786409 5272 Eudicot View MSA
122041976 5273 Angiosperm View MSA
121349377 5274 Embryophyte View MSA
123427476 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 28.6624 0.0 78.9711 High High
cufflinks 10.6739 0.0 28.5319    
cufflinks 9.35034 0.0 25.0604    
cufflinks 7.34293 0.0 19.9043    
cufflinks 1.73871 0.0 5.59042   Low
cufflinks 3.42757 0.0 9.99582    
cufflinks 2.63408 0.0 7.98841    
cufflinks 4.55374 0.0 12.8274    
cufflinks 1.51616 0.0 4.95315   Low
cufflinks 3.288        
cufflinks 0.492       Low
cufflinks 5.003        
cufflinks 1.312        
cufflinks 0.55        
cufflinks 0.335       Low
cufflinks 12.747     High High
cufflinks 0.335       Low
cufflinks 3.942        
cufflinks 7.801     High  
cufflinks 11.341     High High
cufflinks 0.427       Low
cufflinks 13.033     High High
cufflinks 14.592     High High
cufflinks 0.853        
cufflinks 13.811     High High
cufflinks 0.882        

0 Strain