Gene : Glyma.08G193500 G. max Wm82.a2.v1
Defline:  (1 of 8) PTHR23421:SF74 - BETA-GALACTOSIDASE 1 Genomic Order:  1935
Name:  ? Glyma.08G193500 Secondary Identifier:  ? PAC:30540926
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G193500 0.5kb upstream 0.5kb upstream 7305 true Chr08: 15578658-15585962 Glycine max
Glyma.08G193500 0.5kb upstream 0.5kb upstream 500 false Chr08: 15585463-15585962 Glycine max
Glyma.08G193500 0.5kb downstream 0.5kb downstream 7305 true Chr08: 15578158-15585462 Glycine max
Glyma.08G193500 0.5kb downstream 0.5kb downstream 500 false Chr08: 15578158-15578657 Glycine max
Glyma.08G193500 1.0kb upstream 1.0kb upstream 7805 true Chr08: 15578658-15586462 Glycine max
Glyma.08G193500 1.0kb upstream 1.0kb upstream 1000 false Chr08: 15585463-15586462 Glycine max
Glyma.08G193500 1.0kb downstream 1.0kb downstream 7805 true Chr08: 15577658-15585462 Glycine max
Glyma.08G193500 1.0kb downstream 1.0kb downstream 1000 false Chr08: 15577658-15578657 Glycine max
Glyma.08G193500 2.0kb upstream 2.0kb upstream 8805 true Chr08: 15578658-15587462 Glycine max
Glyma.08G193500 2.0kb upstream 2.0kb upstream 2000 false Chr08: 15585463-15587462 Glycine max
Glyma.08G193500 2.0kb downstream 2.0kb downstream 8805 true Chr08: 15576658-15585462 Glycine max
Glyma.08G193500 2.0kb downstream 2.0kb downstream 2000 false Chr08: 15576658-15578657 Glycine max
Glyma.08G193500 5.0kb upstream 5.0kb upstream 11805 true Chr08: 15578658-15590462 Glycine max
Glyma.08G193500 5.0kb upstream 5.0kb upstream 5000 false Chr08: 15585463-15590462 Glycine max
Glyma.08G193500 5.0kb downstream 5.0kb downstream 11805 true Chr08: 15573658-15585462 Glycine max
Glyma.08G193500 5.0kb downstream 5.0kb downstream 5000 false Chr08: 15573658-15578657 Glycine max
Glyma.08G193500 10.0kb upstream 10.0kb upstream 16805 true Chr08: 15578658-15595462 Glycine max
Glyma.08G193500 10.0kb upstream 10.0kb upstream 10000 false Chr08: 15585463-15595462 Glycine max
Glyma.08G193500 10.0kb downstream 10.0kb downstream 16805 true Chr08: 15568658-15585462 Glycine max
Glyma.08G193500 10.0kb downstream 10.0kb downstream 10000 false Chr08: 15568658-15578657 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310260 5265 Fabidae View MSA
124074267 5270 Rosid View MSA
123753100 5271 Pentapetalae View MSA
122794326 5272 Eudicot View MSA
122049621 5273 Angiosperm View MSA
121350261 5274 Embryophyte View MSA
123428653 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.5243 0.0 53.8719    
cufflinks 33.045 0.0 97.0033 High  
cufflinks 184.964 0.0 836.148 High High
cufflinks 23.323 0.0 65.5968 High  
cufflinks 9.94488 0.0 26.5477   Low
cufflinks 10.133 0.0 27.0653   Low
cufflinks 21.0281 0.0 58.3777    
cufflinks 54.1217 0.0 172.902 High  
cufflinks 27.1253 0.0 77.6282 High  
cufflinks 10.412     High  
cufflinks 12.51     High  
cufflinks 34.315     High  
cufflinks 4.763        
cufflinks 6.078        
cufflinks 17.217     High  
cufflinks 29.309     High  
cufflinks 0.811       Low
cufflinks 6.542        
cufflinks 29.943     High  
cufflinks 99.351     High High
cufflinks 5.449        
cufflinks 19.605     High  
cufflinks 3.729        
cufflinks 13.145     High  
cufflinks 67.956     High High
cufflinks 2.022       Low

0 Strain